Interdisciplinary Nanoscience Center

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Publications

Professor Jørgen Kjems

Recent publications

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Zubia-Aranburu, J., Zadegan, R., Nygaard, J. V., Kjems, J., Subramani, R. & Dong, M. (Accepted/In press). Quantifying Structure-Dependent Rigidity of 3D DNA Origami Boxes. Advanced Intelligent Systems . https://doi.org/10.1002/aisy.70517
Zou, L., Luo, Y., Chen, M., Wang, G., Ding, M., Petersen, C. C., Kang, R., Dagnaes-Hansen, F., Zeng, Y., Lv, N., Ma, Q., Le, D. Q. S., Besenbacher, F., Bolund, L., Jensen, T. G., Kjems, J., Pu, W. T. & Bünger, C. (2013). A simple method for deriving functional MSCs and applied for osteogenesis in 3D scaffolds. Scientific Reports, 3, Article 2243. https://doi.org/10.1038/srep02243
Zhou, X., Rahimi, K., Kjems, J. & Lin, L. (2023). High-resolution RNA isoform variation analysis by combining the advantages of single-cell RNA and nanopore sequencing. 44. Abstract from Neuroscience Day, Aarhus, Denmark.
Zhang, Z., Olsen, E. M., Kryger, M., Voigt, N. V., Tørring, T., Gültekin, E., Nielsen, M., MohammadZadegan, R., Andersen, E. S., Nielsen, M. M., Kjems, J., Birkedal, V. & Gothelf, K. V. (2011). A DNA tile actuator with eleven discrete states. Angewandte Chemie International Edition, 50(17), 3983-7. https://doi.org/10.1002/anie.201007642
Zhang, X., Galenkamp, N. S., Heide, N. J. V. D., Valero Moreno, J., Maglia, G. & Kjems, J. (2023). Specific Detection of Proteins by a Nanobody-Functionalized Nanopore Sensor. ACS Nano, 17(10), 9167-9177. https://doi.org/10.1021/acsnano.2c12733

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Professor Duncan Sutherland

Recent publications

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Zeuthen, C. M., Shahrokhtash, A. & Sutherland, D. S. (2019). Nanoparticle adsorption on antifouling polymer brushes. Langmuir, 35(46), 14879-14889. https://doi.org/10.1021/acs.langmuir.9b02537
Zeuthen, C. M., Shahrokhtash, A., Fromell, K., Nilsson Ekdahl, K., Mohammad-Beigi, H. & Sutherland, D. S. (2020). C1q recognizes antigen-bound IgG in a curvature-dependent manner. Nano Research, 13(6), 1651-1658. https://doi.org/10.1007/s12274-020-2788-7
Zanganeh, M., Mason, T. O., Eskandari, H., Rupreo, V., Bagheri, F., Farzadfard, A., Shojaosadati, S. A., Morshedi, D., Sutherland, D. S., Buell, A. K. & Mohammad-Beigi, H. (2026). Shear-sensitive clustering of nanoparticles and their protein corona composition govern α-synuclein aggregation. Environmental Science: Nano, 13(6), 2795-2816. https://doi.org/10.1039/d5en00635j
Wang, J., Jensen, U. B., Jensen, G. V., Shipovskov, S., Balakrishnan, V. S., Otzen, D., Pedersen, J. S., Besenbacher, F. & Sutherland, D. S. (2011). Soft Interactions at Nanoparticles Alter Protein Function and Conformation in a Size Dependent Manner. Nano Letters, 11(11), 4985-4991. https://doi.org/10.1021/nl202940k
van der Westen, R., Rigau, L. H., Sutherland, D. S., Goldie, K., Alebericio, F., Postma, A. & Stadler, B. (2012). Myoblast Cell Interaction with Polydopamine Coated Liposomes. Biointerphases, 7, 8. https://doi.org/10.1007/s13758-011-0008-4

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Tenure-track assistant professor Julián Valero

Recent publications

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Zhang, X., Galenkamp, N. S., Heide, N. J. V. D., Valero Moreno, J., Maglia, G. & Kjems, J. (2023). Specific Detection of Proteins by a Nanobody-Functionalized Nanopore Sensor. ACS Nano, 17(10), 9167-9177. https://doi.org/10.1021/acsnano.2c12733
Yu, Z., Centola, M., Valero, J., Matthies, M., Šulc, P. & Famulok, M. (2021). A Self-Regulating DNA Rotaxane Linear Actuator Driven by Chemical Energy. Journal of the American Chemical Society, 143(33), 13292-13298. https://doi.org/10.1021/jacs.1c06226
Vinther, S. C., Resag, A., Le, K. T. T., Zelle-Rieser, C. C., Strandt, H., Malle, M. G., Christiansen, S. H., Del Frari, B., Stigger, T., Schilling, B., Wohlfarth, J., Thiel, S., Valero, J., Stoitzner, P. & Kjems, J. (2026). Targeting Langerhans cells using a modular mannosylated nucleic acid-based vaccine platform. Journal of Controlled Release, 392, 114741. Article 114741. https://doi.org/10.1016/j.jconrel.2026.114741
Valero Moreno, J., Centola, M., Ma, Y., Škugor, M., Yu, Z., Haydell, M. W., Keppner, D. & Famulok, M. (2019). Design, assembly, characterization, and operation of double-stranded interlocked DNA nanostructures. Nature Protocols, 14(10), 2818-2855. https://doi.org/10.1038/s41596-019-0198-7
Valero Moreno, J., Pal, N., Dhakal, S., Walter, N. G. & Famulok, M. (2018). A bio-hybrid DNA rotor–stator nanoengine that moves along predefined tracks. Nature Nanotechnology, 13(6), 496-503. https://doi.org/10.1038/s41565-018-0109-z

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Professor Steffen Thiel

Recent publications

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Zhang, M., Takahashi, K., Alicot, E. M., Vorup-Jensen, T., Kessler, B., Thiel, S., Jensenius, J. C., Ezekowitz, R. A., Moore, F. D. & Carroll, M. C. (2006). Activation of the lectin pathway by natural IgM in a model of ischemia/reperfusion injury. J. Immunol., 177, 4727-34.
Zhang, J., Koh, J., Lu, J., Thiel, S., Leong, B. S. H., Sethi, S., He, C. Y. X., Ho, B. & Ding, J. L. (2009). Local inflammation induces complement crosstalk which amplifies the antimicrobial response. PLoS Pathogens, 5(1), e1000282. https://doi.org/10.1371/journal.ppat.1000282
Zhang, M., Takahashi, K., Alicot, E. M., Vorup-Jensen, T., Kessler, B., Thiel, S., Jensenius, J. C., Ezekowitz, R. A. B., Moore, F. D. & Carroll, M. C. (2006). Activation of the lectin pathway by natural IgM in a model of ischemia/reperfusion injury. Journal of Immunology, 177(7), 4727-34.
Zarantonello, A., Presumey, J., Simoni, L., Yalcin, E., Fox, R., Hansen, A., Olesen, H. G., Thiel, S., Johnson, M. B., Stevens, B., Laursen, N. S., Carroll, M. C. & Andersen, G. R. (2020). An Ultrahigh-Affinity Complement C4b-Specific Nanobody Inhibits In Vivo Assembly of the Classical Pathway Proconvertase. Journal of Immunology, 205(6), 1678-1694. https://doi.org/10.4049/jimmunol.2000528
Zacho, R. M., Jensen, L., Terp, R., Jensenius, J. C. & Thiel, S. (2012). Studies of the pattern recognition molecule H-ficolin: specificity and purification. Journal of Biological Chemistry. https://doi.org/10.1074/jbc.M111.301044

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Professor Søren Degn

Recent publications

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Wittenborn, T. R., Hagert, C. & Degn, S. E. (2019). Interrogating Individual Autoreactive Germinal Centers by Photoactivation in a Mixed Chimeric Model of Autoimmunity. Journal of visualized experiments : JoVE, 2019(146), Article e59397. https://doi.org/10.3791/59397
Wittenborn, T. R., Hagert, C. F., Ferapontov, A., Fonager, S., Jensen, L., Winther, G. & Degn, S. E. (2021). Comparison of gamma and x-ray irradiation for myeloablation and establishment of normal and autoimmune syngeneic bone marrow chimeras. PLoS One, 16(3), Article e0247501. https://doi.org/10.1371/journal.pone.0247501
Wibrand, C., Wittenborn, T. R., Voss, L. F., Winther, G., Jensen, L., Ferapontov, A., Fonager, S. V., Fahlquist-Hagert, C. & Degn, S. E. (2023). B cell MHC haplotype affects follicular inclusion, germinal center participation and plasma cell differentiation in a mouse model of lupus. Frontiers in Immunology, 14, Article 1258046. https://doi.org/10.3389/fimmu.2023.1258046
Wang, F., Ren, J., Zhou, Y., Huo, W., Liu, H., Qin, M., Jing, Y., Yin, Z., Shi, T., Shan, H., Tan, G., Wang, H., Guo, X., Mei, J., Yue, Z., Hou, Z., Zhou, H., Song, J., Degn, S. E. ... Jiang, Y. (2026). Cross-species comparison of amniote single-cell transcriptomes reveals evolutionary conservation and divergence in the chicken immune system. Nature Communications, 17(1), Article 6031. https://doi.org/10.1038/s41467-026-72642-y
Voss, L. F., Howarth, A. J., Wittenborn, T. R., Hummelgaard, S., Juul-Madsen, K., Kastberg, K. S., Pedersen, M. K., Jensen, L., Papanastasiou, A. D., Vorup-Jensen, T., Weyer, K. & Degn, S. E. (2022). The extrafollicular response is sufficient to drive initiation of autoimmunity and early disease hallmarks of lupus. Frontiers in Immunology, 13, Article 1021370. https://doi.org/10.3389/fimmu.2022.1021370

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Professor Fiona Watt

Professor Dr. Ralf Jungmann

Revised 08.12.2025
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Anne Færch Nielsen