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Interdisciplinary Nanoscience Center

Publications

We publish in a broad array of journals… To view list of publications related to nanoscience/technology by scientists associated with iNANO

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Rosen, C. B., Rodriguez-Larrea, D. & Bayley, H. (2014). Single-molecule site-specific detection of protein phosphorylation with a nanopore. Nature Biotechnology, 32(2), 179-181. https://doi.org/10.1038/nbt.2799

Evans, D. C. (2017). Single-molecule optical microscopy for the investigation of Staphylococcus aureus biofilm formation.

Okholm, K. R., Nooteboom, S. W., Vinther, J. N., Lamberti, V., Dey, S., Andersen, E. S., Zijlstra, P. & Sutherland, D. S. (2024). Single-Molecule Multivalent Interactions Revealed by Plasmon-Enhanced Fluorescence. ACS Nano, 18(52), 35429-35442. https://doi.org/10.1021/acsnano.4c12600

Krüger, A., Birkedal, V., Raarup, M. K., Kristensen, M., Kjems, J. & Besenbacher, F. (2006). Single-molecule Microscopy on Nucleic Acids. Poster session presented at NANOBIO Summer School "The live cell from nano to micro", Cargese, Corse, France.

Birkedal, V., Dong, M., Golas, M. M., Sander, B., Andersen, E. S., Gothelf, K. V., Besenbacher, F. & Kjems, J. (2011). Single molecule microscopy methods for the study of DNA origami structures. Microscopy Research and Technique, 74(7), 688-698. https://doi.org/10.1002/jemt.20962

Jepsen, M. B., Beerens, N., Nechyponuk-Zloy, V., Besenbacher, F., Kjems, J. & Birkedal, V. (2011). Single molecule FRET microscopy studies of tRNA annealing onto the HIV-1 genome. Poster session presented at International Bunsen Discussion Meeting Förster resonance energy transfer in life science, Germany.

Birkedal, V., Krüger, A., Raarup, M. K., Kristensen, M., Kjems, J. & Besenbacher, F. (2006). Single molecule FRET microscopy on G-quadruplex DNA structures. Poster session presented at Single Molecule Picoquant Workshop, Berlin, Germany.

Krüger, A., Bukowy, Z., Lutzelberger, M., Stevnsner, T., Kristensen, M., Kjems, J., Besenbacher, F. & Raarup, M. K. (2005). Single-molecule FRET microscopy on DNA telomeres. Poster session presented at Bio-image summer school at ENS, Paris, France.

Birkedal, V., Krüger, A. C. & Besenbacher, F. (2011). Single Molecule FRET Microscopy of Immobilized DNA Molecules: Keeping Track of Dye Integrity and Stoichiometry. Biophysical Journal, 100(3), 75a.

Kristoffersen, E. L., Aznauryan, M. & Birkedal, V. (2018). Single-Molecule FRET Investigations of Tandem Human Telomeric G-Quadruplex Structures. Biophysical Journal, 114(3 ), 597a. https://doi.org/10.1016/j.bpj.2017.11.3261

Krüger, A. C. & Birkedal, V. (2013). Single molecule FRET data analysis procedures for FRET efficiency determination: Probing the conformations of nucleic acid structures. Methods, 64, 36–42 . https://doi.org/10.1016/j.ymeth.2013.04.001

Jepsen, M. DE., Sørensen, R. S., Andersen, E. S., Kjems, J. & Birkedal, V. (2015). Single Molecule FRET Analysis of the Closed and Open States of a DNA Origami Box. Biophysical Journal, 108(2, suppl. 1), 175a. https://doi.org/10.1016/j.bpj.2014.11.968

Hildebrandt, L., Preus, S., Zhang, Z., Voigt, N. V., Gothelf, K. V. & Birkedal, V. (2014). Single Molecule FRET Analysis of the 11 Discrete Steps of a DNA Actuator. Journal of the American Chemical Society, 136(25), 8957-8962. https://doi.org/10.1021/ja502580t

Hildebrandt, L. (2015). Single molecule fluorescence microscopy studies of man-made DNA nanostructures.

Aznauryan, M. & Birkedal, V. (2017). Single - Molecule Fluorescence Microscopy of Folding Dynamics of G-Quadruplex DNA. Biophysical Journal, 112(3), 214A-215A.

Kilibarda, F., Strobel, A., Sendler, T., Wieser, M., Mortensen, M., Trads, J. B., Helm, M., Kerbusch, J., Scheer, E., Gemming, S., Gothelf, K. V. & Erbe, A. (2021). Single-Molecule Doping: Conductance Changed By Transition Metal Centers in Salen Molecules. Advanced Electronic Materials, 7(10), Article 2100252. https://doi.org/10.1002/aelm.202100252

Stougaard, M., Lohmann, J. S., Mancino, A., Celik, S., Andersen, F. F., Koch, J. E. & Knudsen, B. R. (2008). Single molecule detection of human topoisomerase I cleavage-ligation activity. Poster session presented at 6th annual iNANO meeting, Denmark.

Voigt, N. V., Tørring, T., Rotaru, A., Jacobsen, M. F., Ravnsbæk, J. B., Subramani, R., Mamdouh, W., Kjems, J., Mokhir, A., Besenbacher, F. & Gothelf, K. V. (2010). Single-molecule chemical reactions on DNA origami. Nature Nanotechnology, 5(3), 200-203. https://doi.org/10.1038/nnano.2010.5

Helmig, S. W., Rotaru, A., Arian, D., Kovbasyuk, L., Arnbjerg, J., Ogilby, P. R., Kjems, J., Mokhir, A., Besenbacher, F. & Gothelf, K. V. (2010). Single Molecule Atomic Force Microscopy Studies of Photosensitized Singlet Oxygen Behavior on a DNA Origami Template. A C S Nano, 4(12), 7475-7480. https://doi.org/10.1021/nn102701f

Jepsen, M. D. E., Sørensen, R. S., Maffeo, C., Aksimentiev, A., Kjems, J. & Birkedal, V. (2019). Single molecule analysis of structural fluctuations in DNA nanostructures. Nanoscale, 11(39), 18475-18482. https://doi.org/10.1039/c9nr03826d

Salazar Moreira, N. J., Beinik, I. & Lauritsen, J. V. (2017). Single-layer MoS₂ formation by sulfidation of molybdenum oxides in different oxidation states on Au(111). Physical Chemistry Chemical Physics, 21(21), 14020-14029. https://doi.org/10.1039/C7CP00958E

Bruix, A., Miwa, J., Hauptmann, N., Wegner, D., Ulstrup, S., Grønborg, S. S., Sanders, C., Dendzik, M., Grubisic Cabo, A., Bianchi, M., Lauritsen, J. V., Khajetoorians, A. A., Hammer, B. & Hofmann, P. (2016). Single-layer MoS2 on Au(111): Band gap renormalization and substrate interaction. Physical Review B, 93(16), Article 165422. https://doi.org/10.1103/PhysRevB.93.165422

Huang, L. Z., Wei, X., Gao, E., Zhang, C., Hu, X. M., Chen, Y., Liu, Z., Finck, N., Lützenkirchen, J. & Dionysiou, D. D. (2020). Single Fe atoms confined in two-dimensional MoS₂ for sulfite activation: A biomimetic approach towards efficient radical generation. Applied Catalysis B: Environmental, 268, Article 118459. https://doi.org/10.1016/j.apcatb.2019.118459

Gellert, N. C., Kantor, I., Christensen, T. E. K., Rodriguez-Palomo, A., Thomson, E. L., Høeg, A. L., Niese, S., Olsen, U. L., Dahl, A. B., Dyrby, T. B., Birkedal, H., Poulsen, H. F. & Mokso, R. (2025). Single exposure X-ray nano-tomography in the near-field Fresnel regime with multilayer Laue lenses. Optics Express, 33(20), 42221-42239. https://doi.org/10.1364/OE.565345

Vosegaard, T. (2021). Single-crystal NMR spectroscopy. Progress in Nuclear Magnetic Resonance Spectroscopy, 123, 51-72. https://doi.org/10.1016/j.pnmrs.2021.01.001

Eikeland, E. Z., Borup, M., Thomsen, M. K., Roelsgaard, M., Overgaard, J., Spackman, M. A. & Iversen, B. B. (2020). Single-Crystal High-Pressure X-ray Diffraction Study of Host Structure Compression in Clathrates of Dianin's Compound. Crystal Growth & Design, 20(6), 4092-4099. https://doi.org/10.1021/acs.cgd.0c00360

Kraus, S., Huttmann, F., Fischer, J., Knispel, T., Bischof, K., Herman, A., Bianchi, M., Stan, R. M., Holt, A. J., Caciuc, V., Tsukamoto, S., Wende, H., Hofmann, P., Atodiresei, N. & Michely, T. (2022). Single-crystal graphene on Ir(110). Physical Review B, 105(16), Article 165405. https://doi.org/10.1103/PhysRevB.105.165405

Wei, W., Lu, X., Wang, Z., Pérez, B., Liu, J., Wu, C., Dong, MD., Feng, F., Mu, H. & Guo, Z. (2017). Single-component solid lipid nanocarriers prepared with ultra-long chain amphiphilic lipids. Journal of Colloid and Interface Science, 505, 392-401. https://doi.org/10.1016/j.jcis.2017.06.022

Svane, K., Dong, Y., Groves, M. N., Demers-Carpentier, V., Lemay, J.-C., Ouellet, M., Hammer, B. & McBreen, P. H. (2015). Single-chiral-catalytic-surface-sites: STM and DFT study of stereodirecting complexes formed between (R)-1-(1-naphthyl)ethylamine and ketopantolactone on Pt(111). Catalysis Science & Technology, 5(2), 743-753. https://doi.org/10.1039/c4cy01044b

Zeng, G., Müller, T. & Meyer, R. L. (2014). Single-cell force spectroscopy of bacteria enabled by naturally derived proteins. Langmuir, 30(14), 4019-25. https://doi.org/10.1021/la404673q

Jensen, S. J., Harmsen, C., Nielsen, M. J., Stougaard, M., Leong, K. W., Knudsen, B. R. & Ho, Y.-P. (2013). Single cell enzyme diagnosis on the chip. International Conference on Micro Electro Mechanical Systems, 911 - 914. https://doi.org/10.1109/MEMSYS.2013.6474392

Hong, Y., Gao, Z., Chen, Z., Li, Q., Cui, J. & Dong, M. (2025). Single-atom iron nanozyme with oxidase-like activity for ultrasensitive polyphenol detection. Nanoscale, 17(43), 25036-25043. https://doi.org/10.1039/d5nr02482j

Kilpeläinen, S., Kujala, J., Tuomisto, F., Slotte, J., Lu, Y.-W. & Nylandsted Larsen, A. (2013). Si nanoparticle interfaces in Si/SiO solar cell materials. Journal of Applied Physics, 114(16), 164316-164316-4. https://doi.org/10.1063/1.4824826

Pankratov, V., Osinniy, V., Kotlov, A., Nylandsted Larsen, A. & Bech Nielsen, B. (2011). Si nanocrystals embedded in SiO2: Optical studies in the vacuum ultraviolet range. Physical Review B, 83. https://doi.org/10.1103/PhysRevB.83.045308

Bianchi, M., Hatch, R. C., Hofmann, P., Mi, J. & Iversen, B. B. (2011). Simultaneous Quantization of Bulk Conduction and Valence States through Adsorption of Nonmagnetic Impurities on Bi₂Se₃. Physical Review Letters, 107(8), 086802-1 - 086802-4. https://doi.org/10.1103/PhysRevLett.107.086802

Li, Y., Shi, G., Chen, T., Zhu, L., Yu, D., Sun, Y., Besenbacher, F. & Yu, M. (2022). Simultaneous increase of conductivity, active sites and structural strain by nitrogen injection for high-yield CO₂ electro-hydrogenation to liquid fuel. Applied Catalysis B: Environmental, 305, Article 121080. https://doi.org/10.1016/j.apcatb.2022.121080

Song, L., Zhang, J. & Iversen, B. B. (2017). Simultaneous improvement of power factor and thermal conductivity via Ag doping in p-type Mg₃Sb₂thermoelectric materials. Journal of Materials Chemistry A, 5(10), 4932-4939. https://doi.org/10.1039/C6TA08316A

Ijeri, V., Vase, K. H., Pedersen, S. U. & Daasbjerg, K. (2007). Simultaneous electrografting of organic layers with different functionalities on carbon electrodes. Paper presented at Electrochemical Science and Technology, Aarhus, Denmark.

Kube, R., Bracht, H., Hansen, J. L., Nylandsted Larsen, A., Haller, E. E., Paul, S. & Lerch, W. (2009). Simultaneous diffusoin of Si and Ge in isotopically controlled Si_1-x heterostructures. Materials Science in Semiconductor Processing, 11(5-6), 378-383. https://doi.org/10.1016/j.mssp.2008.07.005

Zou, Y. B., Zheng, A. C., Yin, C. Q., Du, L., Daasbjerg, K. & Hu, X. M. (2025). Simultaneous CO₂ Capture and Conversion From Flue Gas Using Bicarbonate Electrolysis Over a Nickel Single-Atom Catalyst. Small, Article e09800. Advance online publication. https://doi.org/10.1002/smll.202509800

Mazzola, F., Wells, J. W., Pakpour-Tabrizi, A. C., Jackman, R. B., Thiagarajan, B., Hofmann, P. & Miwa, J. A. (2018). Simultaneous Conduction and Valence Band Quantization in Ultrashallow High-Density Doping Profiles in Semiconductors. Physical Review Letters, 120(4), Article 046403. https://doi.org/10.1103/PhysRevLett.120.046403

Nielsen, A. B., Nielsen, N. C., Gath, J., Székely, K., Ernst, M. & Meier, B. H. (2012). Simultaneous acquisition of PAR and PAIN spectra. Journal of Biomolecular N M R, Volume 52(Issue 4), 283-288. https://doi.org/10.1007/s10858-012-9616-7

Oteri, F., Falconi, M., Chillemi, G., Andersen, F. F., Oliveira, C. L. P., Pedersen, J. S., Knudsen, B. R. & Desideri, A. (2011). Simulative Analysis of a Truncated Octahedral DNA Nano-Cage Family Indicates the Single-Stranded Thymidine Linkers as the Major Player for the Conformational Variability. Journal of Physical Chemistry Part C: Nanomaterials and Interfaces, 115(34), 16819-16827.

Cheng, C. J., Koldso, H., Van der Kamp, M. W., Schiott, B. & Daggett, V. (2017). Simulations of membrane-bound diglycosylated human prion protein reveal potential protective mechanisms against misfolding. Journal of Neurochemistry, 142(1), 171-182. https://doi.org/10.1111/jnc.14044

Wittenborn, T. R., Nielsen, T., Thomsen, J. S., Horsman, M. R. & Nygaard, J. V. (2016). Simulation of heterogeneous molecular delivery in tumours using μCT reconstructions and MRI validation. Microvascular Research, 108, 69-74. https://doi.org/10.1016/j.mvr.2016.08.004

Bak, M., Rasmussen, J. T. & Nielsen, N. C. (2011). SIMPSON - An important driver for numerical simulations in solid-state NMR spectroscopy. Journal of Magnetic Resonance, 213(2), 401-403. https://doi.org/10.1016/j.jmr.2011.08.002

Bak, M., Rasmussen, J. T. & Nielsen, N. C. (2000). SIMPSON: A general program for solid-state NMR spectroscopy. Journal of Magnetic Resonance, 147, 296-330.

Madenci, D., Salonen, A., Schurtenberger, P., Pedersen, J. S. & Egelhaaf, S. U. (2011). Simple model for the growth behaviour of mixed lecithin–bile salt micelles. Physical Chemistry Chemical Physics, 13(8), 3171–3178. https://doi.org/10.1039/c0cp01700k

Gong, Y., Li, C., Huang, X., Luo, Y., Li, D., Meng, Q. & Iversen, B. B. (2013). Simple Method for Manufacturing Pt Counter Electrodes on Conductive Plastic Substrates for Dye-Sensitized Solar Cells. A C S Applied Materials and Interfaces, 5(3), 795-800. https://doi.org/10.1021/am302360g

Afrough, A., Mokhtari, R. & Feilberg, K. L. (2024). Simple MATLAB and Python scripts for multi-exponential analysis. Magnetic Resonance in Chemistry, 62(10), 698-711. https://doi.org/10.1002/mrc.5453

Displaying results 1851 to 1900 out of 8707

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Lise Refstrup Linnebjerg Pedersen