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Interdisciplinary Nanoscience Center

Danish Center for Ultrahigh Field NMR Spectroscopy

Publications

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Bertram, H. C., Kristensen, N. B., Malmendal, A., Nielsen, N. C., Jensen, S. K. & Harnon, D. L. (2004). An NMR-based metabolomic approach to assess metabolism in splanchnic tissues of steers. J. Anim. Feed Sci., 13, 295-298.

Bertram, H. C., Jakobsen, H. J. & Nielsen, O. B. (2005). Origin of the high-frequency resonances in 1H NMR spectra of muscle tissue: an in vitro slow magic-angle spinning study. Journal of Agricultural and Food Chemistry, 53, 3229-3234.

Bertram, H. C., Kristensen, N. B., Malmendal, A., Nielsen, N. C., Bro, R., Andersen, H. J. & Harmon, D. L. (2005). A metabolomic investigation of splanchnic metabolism using 1H NMR spectroscopy of bovine blood plasma. Analystica Chimica Acta, 536, 1-6.

Bertram, H. C., Kristensen, N. B., Vestergaard, M., Jensen, S. K., Sehested, J., Nielsen, N. C. & Malmendal, A. (2009). Metabolic characterization of rumen epithelial tissue from dairy calves fed different starter diets using ¹H NMR spectroscopy. Livestock Science, 120(1-2), 127-134. https://doi.org/10.1016/j.livsci.2008.05.001

Bertram, H. C., Bach Knudsen, K. E., Serena, A., Malmendal, A., Nielsen, N. C., Fretté, X. C. & Andersen, H. J. (2006). NMR-based metabonomic studies reveal changes in the biochemical profile of plasma and urine from pigs fed high fibre rye bread. British J. Nutr., 65, 955-962.

Bertram, H. C., Malmendal, A., Nielsen, N. C., Straadt, I. K., Larsen, T., Bach Knudsen, K. E. & Lærke, H. N. (2009). NMR-based metabonomics reveals that plasma betaine increases upon intake of high-fiber rye buns in hypercholesterolemic pigs. Molecular Nutrition & Food Research, 53, 1055-1062. https://doi.org/10.1002/mnfr.200800344

Bertram, H. C., Jakobsen, H. J. & Nielsen, O. B. (2005). Origin of the High-Frequency Resonances in ¹H NMR Spectra of Muscle Tissue: An in Vitro Slow Magic-Angle Spinning Study. Journal of Agricultural and Food Chemistry, 53, 3229-3234.

Bertelsen, K., Pedersen, J. M., Rasmussen, B. S., Skrydstrup, T., Nielsen, N. C. & Vosegaard, T. (2007). Membrane-bound conformation of peptaibols with methyl-deuterated a-amino isobutyric acids by ²H solid-state NMR spectroscopy. Journal of the American Chemical Society, 129, 14717-14723.

Bertelsen, K., Pedersen, J. M., Nielsen, N. C. & Vosegaard, T. (2007). 2D separated-local field spectra from projections of 1D experiments. Journal of Magnetic Resonance, 184, 330-6.

Bertelsen, K., Jensen, B. P., Thøgersen, L., Tajkhorshid, E., Schiøtt, H. B., Skrydstrup, T., Nielsen, N. C. & Vosegaard, T. (2009). Residue-Specific Information about the Dynamics of Antimicrobial Peptides from ¹H−¹⁵N and ²H Solid-State NMR Spectroscopy. Journal of the American Chemical Society, 131(51), 18335–18342. https://doi.org/10.1021/ja908604u

Bertelsen, K., Jensen, B. P., Nielsen, N. C. & Vosegaard, T. (2009). A dynamic View on Membrane-Bound Peptides by Combined 15N and 2H Oriented-Sample Solid-State NMR. Poster session presented at 50th Experimental NMR Conference (ENC), Asilomar, CA, United States.

Bertelsen, K., Dorosz, J., Hansen, S. K., Nielsen, N. C. & Vosegaard, T. (2012). Mechanisms of Peptide-Induced Pore Formation in Lipid Bilayers Investigated by Oriented 31P Solid-State NMR Spectroscopy. P L o S One, 7(10). https://doi.org/10.1371/journal.pone.0047745

Bertelsen, K., Vad, B., Nielsen, E. H. T., Hansen, S. K., Skrydstrup, T., Otzen, D., Vosegaard, T. & Nielsen, N. C. (2011). Long-term-stable ether-lipid vs conventional ester-lipid bicelles in oriented solid-state NMR: altered structural information in studies of antimicrobial peptides. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 115(8), 1767-1774. https://doi.org/10.1021/jp110866g

Bellmann, F., Damidot, D., Möser, B. & Skibsted, J. (2010). Improved evidence for the existence of an intermediate phase during hydration of tricalcium silicate. Cement and Concrete Research, 40, 875-884.

Bechinger, B., Juhl, D. W., Glattard, E. & Aisenbrey, C. (2020). Revealing the Mechanisms of Synergistic Action of Two Magainin Antimicrobial Peptides. Frontiers in Medical Technology, 2, Article 615494. https://doi.org/10.3389/fmedt.2020.615494

Bayley, M., Overgaard, J., Høj, A. S., Malmendal, A., Nielsen, N. C., Holmstrup, M. & Wang, T. (2010). Metabolic changes during estivation in the common earthworm Aporrectodea caliginosa. Physiological and Biochemical Zoology, 83(3), 541-550. https://doi.org/10.1086/651459

Basse, K., Jain, S. K., Bakharev, O. N. & Nielsen, N. C. (2014). Efficient Polarization Transfer between Spin-1/2 and ¹⁴N Nuclei in Solid-State MAS NMR Spectroscopy. Journal of Magnetic Resonance, 244, 85-89. https://doi.org/10.1016/j.jmr.2014.04.017

Basse, K., Shankar, R., Bjerring, M., Vosegaard, T., Nielsen, N. C. & Nielsen, A. B. (2016). Handling the influence of chemical shift in amplitude-modulated heteronuclear dipolar recoupling solid-state NMR. Journal of Chemical Physics, 145(9), Article 094202. https://doi.org/10.1063/1.4961736

Barzgar, S., Yan, Y., Tarik, M., Skibsted, J., Ludwig, C. & Lothenbach, B. (2022). A long-term study on structural changes in calcium aluminate silicate hydrates. Materials and Structures/Materiaux et Constructions, 55(10), Article 243. https://doi.org/10.1617/s11527-022-02080-x

Balsgart, N. M. & Vosegaard, T. (2012). Fast Forward Maximum Entropy Reconstruction of Sparsely Sampled Data. Journal of Magnetic Resonance, 223, 164. https://doi.org/10.1016/j.jmr.2012.07.002

Balsgart, N. M., Mulbjerg, M., Guo, Z., Bertelsen, K. & Vosegaard, T. (2016). High Throughput Identification and Quantification of Phospholipids in Complex Mixtures. Analytical Chemistry, 88(4), 2170-2176. https://doi.org/10.1021/acs.analchem.5b03798

Bak, M., Bywater, R. P., Hohwy, M., Thomsen, J. K., Adelhorst, K., Jakobsen, H. J., Sørensen, O. W. & Nielsen, N. C. (2001). Conformation of Alamethicin in Oriented Phospholipid Bilayers Determined by 15N Solid-State Nuclear Magnetic Resonance. Biophysical Journal, (81), 1684-1698.

Bak, M., Bywater, R., Hohwy, M., Thomsen, J. K., Adelhorst, K., Jakobsen, H. J., Sørensen, O. W. & Nielsen, N. C. (2001). Conformation of alamethicin in oriented phospholipid bilayers determined by ¹⁵N solid-state NMR. Biophysical Journal, 81, 1684-1698.

Bak, M., Rasmussen, J. T. & Nielsen, N. C. (2000). SIMPSON: A general program for solid-state NMR spectroscopy. Journal of Magnetic Resonance, 147, 296-330.

Bak, M., Rasmussen, L. K., Petersen, T. E. & Nielsen, N. C. (2001). Colloidal calcium phosphates in casein micelles studied by slow-speed-spinning ³¹P magic angle spinning solid-state nuclear magnetic resonance. J. Dairy Sci., 84, 1310-1319.

Bak, M., Schultz, R., Nielsen, N. C., Kiihne, S. (Ed.) & deGroot, H. J. M. (Ed.) (2001). Numerical simulations for experiment design and extraction of structural parameters in biological solid-state NMR spectroscopy. In Perspectives of Solid-State NMR in Biology (pp. 95-110). Kluwer Academic Publishers.

Bak, M., Schultz, R., Vosegaard, T. & Nielsen, N. C. (2002). Specification and visualization of anisotropic interaction tensors for numerical simulation of solid-state NMR experiments on polypeptide structures. Journal of Magnetic Resonance, 154.

Bak, M., Sørensen, M. D., Sørensen, E. S., Rasmussen, L. K., Sørensen, O. W., Petersen, T. E. & Nielsen, N. C. (2000). The structure of the membrane-binding 38 C-terminal residues from bovine PP3 determined by liquid- and solid-state NMR spectroscopy. FEBS journal, 267, 188-199.

Bak, M., Thomsen, J. K., Jakobsen, H. J., Petersen, S. E., Petersen, T. E. & Nielsen, N. C. (2000). Solid-state ¹³C and ³¹P MAS NMR analysis of urinary stones. J. Urol., 164, 856-863.

Bak, M. & Nielsen, N. C. (1997). Relative orientation of chemical shielding and dipolar coupling tensors: Mixed single- and double-quantum homonuclear rotary resonancenuclear magnetic resonance of rotating solids. Journal of Chemical Physics, 106(18), 7587-7599.

Bak, M. & Nielsen, N. C. (1997). REPULSION, A Novel Approach to Efficient Powder Averaging in Solid-State NMR. Journal of Magnetic Resonance, 125(1), 132-139.

Bak, M., Rasmussen, J. T. & Nielsen, N. C. (2011). SIMPSON - An important driver for numerical simulations in solid-state NMR spectroscopy. Journal of Magnetic Resonance, 213(2), 401-403. https://doi.org/10.1016/j.jmr.2011.08.002

Ayed, A., Mulder, F. A., Yi, G. S., Lu, Y., Kay, L. E. & Arrowsmith, C. H. (2001). Latent and active p53 are identical in conformation. Nature Structural and Molecular Biology, 8(9), 756-760. https://doi.org/10.1038/nsb0901-756

Avanti, C., Oktaviani, N. A., Hinrichs, W. L. J., Frijlink, H. W. & Mulder, F. A. A. (2013). Aspartate buffer and divalent metal ions affect oxytocin in aqueous solution and protect it from degradation. International Journal of Pharmaceutics, 444(1-2), 139-145. https://doi.org/10.1016/j.ijpharm.2013.01.051

Arnbjerg, L. M., Bomholdt Ravnsbæk, D., Filinchuk, Y., Vang, R. T., Cerenius, Y., Besenbacher, F., Jørgensen, J. E., Jakobsen, H. J. & Jensen, T. R. (2009). Structure and Dynamics for LiBH₄-LiCl Solid Solutions. Chemistry of Materials, 21(24), 5772-5782. https://doi.org/10.1021/cm902013k

Angmo, D., Bjerring, M., Nielsen, N. C., Thomson, B. C. & Krebs, F. C. (2015). Fullerene alloy formation and the benefits for efficient printing of ternary blend organic solar cells. Journal of Materials Chemistry, 3(21), 5541-5548. https://doi.org/10.1039/c5tc00781j

Andreasen, M., Nielsen, S. B., Mittag, T., Bjerring, M., Nielsen, J. T., Zhang, S., Nielsen, E. H., Jeppesen, M., Christiansen, G., Besenbacher, F., Dong, M., Nielsen, N. C., Skrydstrup, T. & Otzen, D. E. (2012). Modulation of fibrillation of hIAPP core fragments by chemical modification of the peptide backbone. B B A - Proteins and Proteomics, 1824(2), 274-85. https://doi.org/10.1016/j.bbapap.2011.10.014

Andreasen, M., Nielsen, S. B., Runager, K., Christiansen, G., Nielsen, N. C., Enghild, J. J. & Otzen, D. (2012). Polymorphic Fibrillation of the Destabilized Fourth Fasciclin-1 Domain Mutant A₅₄6T of the Transforming Growth Factor-β-induced Protein (TGFBIp) Occurs through Multiple Pathways with Different Oligomeric Intermediates. Journal of Biological Chemistry, 287(41), 34730-34742. https://doi.org/10.1074/jbc.M112.379552

André, I., Linse, S. & Mulder, F. A. A. (2007). Residue-specific pK_a determination of lysine and arginine side chains by indirect ¹⁵N and ¹³C NMR spectroscopy: Application to apo calmodulin. Journal of the American Chemical Society, 129(51), 15805-15813. https://doi.org/10.1021/ja0721824

Andersen, M. D., Jakobsen, H. J. & Skibsted, J. (2002). Characterization of the alpha->beta phase transition in Friedels salt (Ca2Al(OH)6Cl.2H2O) by variable-temperature 27Al MAS NMR spectroscopy. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 106, 6676-6682.

Andersen, M. D., Jakobsen, H. J. & Skibsted, J. (2004). Characterization of white Portland cement hydration and the C-S-H structure in the presence of sodium aluminate by ²⁷Al and ²⁹Si MAS NMR spectroscopy. Cement Concrete Res., 34, 857-868.

Andersen, M. D., Jakobsen, H. J. & Skibsted, J. (2005). Effects of T₂-relaxation in MAS NMR spectra of the satellite transitions for quadrupolar nuclei: a ²⁷Al MAS and single-crystal NMR study of alum KAl(SO₄)₂^.12H₂O. Journal of Magnetic Resonance, (173), 209-217.

Andersen, M. D., Jakobsen, H. J. & Skibsted, J. (2003). Incorporation of aluminum in the calcium silicate hydrate (C-S-H) of hydrated Portland cements: A high-field 27Al and 29Si MAS NMR investigation. Inorg. Chem., 42, 2280-2287. http://pubs.acs.org/cgi-bin/article.cgi/inocaj/2003/42/i07/pdf/ic020607b.pdf

Andersen, M. D., Jakobsen, H. J. & Skibsted, J. B. (2006). A new aluminium-hydrate species in hydrated Portland cements characterized by ²⁷Al and ²⁹Si MAS NMR spectroscopy. Cem. Concr. Res., 36, 3-17.

Andersen, L. M., Wind, T., Hansen, H. D., Blouse, G., Christensen, A., Jensen, J. K., Malmendal, A., Nielsen, N. C. & Andreasen, P. (2007). Urokinase-type plasminogen activator-inhibiting cyclic peptides demonstrate new modalities for inhibition of serine proteases. Poster session presented at XIth International Workshop on Molecular and Cellular Biology of Plasminogen Activation, Stockholm, Sweden.

Andersen, O. J., Risør, M. W., Poulsen, E. C., Nielsen, N. C., Miao, Y., Enghild, J. J. & Schiøtt, B. (2017). The reactive center loop insertion in α-1-antitrypsin captured by accelerated molecular dynamics simulation. Biochemistry, 56(4), 634-646. https://doi.org/10.1021/acs.biochem.6b00839

Andersen, C. B., Yoshimura, Y., Nielsen, J., Otzen, D. E. & Mulder, F. A. A. (2021). How epigallocatechin gallate binds and assembles oligomeric forms of human alpha-synuclein. The Journal of Biological Chemistry, 296, Article 100788. https://doi.org/10.1016/j.jbc.2021.100788

Andersen, C., Grønnemose, A. L., Pedersen, J. N., Nowak, J. S., Christiansen, G., Nielsen, J., Mulder, F. A. A., Otzen, D. E. & Jørgensen, T. J. D. (2021). Lipid Peroxidation Products HNE and ONE Promote and Stabilize Alpha-Synuclein Oligomers by Chemical Modifications. Biochemistry, 60(47), 3644-3658. https://doi.org/10.1021/acs.biochem.1c00478

Andersen, F. D., Pedersen, K. D., Wilkens Juhl, D., Mygind, T., Chopin, P., B. Svenningsen, E., Poulsen, T. B., Braad Lund, M., Schramm, A., Gotfredsen, C. H. & Tørring, T. (2022). Triculamin: An Unusual Lasso Peptide with Potent Antimycobacterial Activity. Journal of Natural Products, 85(6), 1514-1521. https://doi.org/10.1021/acs.jnatprod.2c00065

Andersen, C. B., Lausdahl, A. K., Nielsen, J., Clausen, M. P., Mulder, F. A. A., Otzen, D. E. & Arnspang, E. C. (2023). 4-Oxo-2-nonenal-Induced α-Synuclein Oligomers Interact with Membranes in the Cell, Leading to Mitochondrial Fragmentation. Biochemistry, 62(16), 2417-2425. https://doi.org/10.1021/acs.biochem.3c00114

Displaying results 801 to 850 out of 858

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Revised 17.04.2023

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Lise Refstrup Linnebjerg Pedersen