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Interdisciplinary Nanoscience Center

Danish Center for Ultrahigh Field NMR Spectroscopy

Publications

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Kehlet, C., Bjerring, M., Sivertsen, A. C., Kristensen, T., Enghild, J. J., Glaser, S. J., Khaneja, N. & Nielsen, N. C. (2007). Optimal control based NCO and NCA experiments for spectral assignment in biological solid-state NMR spectroscopy. Journal of Magnetic Resonance, 188(2), 216-230. https://doi.org/10.1016/j.jmr.2007.06.011

Hansen, J. Ø., Kehlet, C., Bjerring, M., Vosegaard, T., Glaser, S., Khaneja, N. & Nielsen, N. C. (2007). Optimal control based design of composite dipolar recoupling experiments by analogy to single-spin inversion pulses. Chemical Physics Letters, 447, 154-161. https://doi.org/10.1016/j.cplett.2007.08.072

Wei, D., Akbey, U., Jensen, B. P., Oschkinat, H., Reif, B., Bjerring, M. & Nielsen, N. C. (2011). Optimal 2H rf pulses and 2H-13C cross-polarization methods for solid-state 2H MAS NMR of perdeuterated proteins. The Journal of Physical Chemistry Letters, 2(11), 1289-1294. https://doi.org/10.1021/jz200511b

Sørensen, M. K., Balsgart, N. M., Beyer, M., Jensen, O. N. & Nielsen, N. C. (2022). On-Site Measurement of Fat and Protein Contents in Milk Using Mobile NMR Technology. Molecules, 27(3), Article 583. https://doi.org/10.3390/molecules27030583

Larsen, F. H., Rasmussen, T., Pedersen, W. B., Nielsen, N. C. & Jakobsen, H. J. (1999). Observation of immobile regions in natural rubber at ambient temperature by solid-state ¹³C CP/MAS NMR spectroscopy. Polymer, 40, 7013-7017.

Wili, N., Nielsen, A. B., Carvalho, J. P. & Nielsen, N. C. (2024). Observation of dynamic nuclear polarization echoes. Science Advances, 10(42), Article eadr2420. https://doi.org/10.1126/sciadv.adr2420

Vosegaard, T., Tosner, Z. & Nielsen, N. C. (2010). Numerical Simulations in Solid-State NMR with SIMPSON. In M. A.E. & T. Polenova (Eds.), Solid-State NMR of Biopolymers (pp. 377-394). John Wiley & Sons Ltd.

Vosegaard, T., Tosner, Z. & Nielsen, N. C. (2010). Numerical Simulations in Solid-State NMR with SIMPSON. In Encyclopedia of Magnetic Resonance Wiley. https://doi.org/10.1002/9780470034590.emrstm1097

Sivertsen, A. C., Bjerring, M., Kehlet, C. T., Vosegaard, T. & Nielsen, N. C. (2005). Numerical Simulations in Biological Solid-State NMR Spectroscopy. Ann. R. NMR. S., 54, 243-293.

Bak, M., Schultz, R., Nielsen, N. C., Kiihne, S. (Ed.) & deGroot, H. J. M. (Ed.) (2001). Numerical simulations for experiment design and extraction of structural parameters in biological solid-state NMR spectroscopy. In Perspectives of Solid-State NMR in Biology (pp. 95-110). Kluwer Academic Publishers.

Kirkegaard, K., Svane, A. S. P., Nielsen, J. S., Hindkjær, J. J., Nielsen, N. C. & Ingerslev, H. J. (2014). Nuclear magnetic resonance metabolomic profiling of Day 3 and 5 embryo culture medium does not predict pregnancy outcome in good prognosis patients: a prospective cohort study on single transferred embryos. Human reproduction (Oxford, England), 29(11), 2413-20. https://doi.org/10.1093/humrep/deu236

Sørensen, M. K., Jensen, O., Bakharev, O. N., Nyord, T. & Nielsen, N. C. (2015). NPK NMR Sensor: Online Monitoring of Nitrogen, Phosphorus, and Potassium in Animal Slurry. Analytical Chemistry, 87(13), 6446-6450. https://doi.org/10.1021/acs.analchem.5b01924

Dupont, D. M., Hansen, M., Jensen, J. K., Kristiansen, S. K., Mathiasen, L., Pedersen, K. E., Skeldal, S., Wind, T., Malmendal, A., Schiøtt, B., Nielsen, N. C. & Andreasen, P. (2006). Novel conformational probes and activity regulators of plasminogen avtivator inhibitor-1, isolated from phage-displayed disulfide bridge constrained peptide libraries. Poster session presented at Annual Meeting of the "Cancer Degradome", København, Denmark.

Vinther, J. M. & Nielsen, N. C. (2011). Notes on NMR spectroscopy: an introduction to the principles of NMR spectroscopy. Kemisk Institut, Aarhus Universitet.

Kehlet, C., Del Federico, E., Schahbaz, H., Catalano, A., Dittmer, J. & Nielsen, N. C. (2013). Non-invasive characterization of polymeric materials in relation to art conservation using unilateral NMR combined with multivariate data analysis. Analytical Methods, 5(17), 4480-4486. https://doi.org/10.1039/c3ay40650d

Nielsen, G., Malmendal, A., Meissner, A., Møller, J. V. & Nielsen, N. C. (2003). NMR studies of the fifth transmembrane segment of sarcoplasmic reticulum Ca₂+-ATPase reveals a hinge close to the Ca₂+ ligating residues. FEBS Letters, 544, 50-56.

Underhaug, J., Jakobsen, L. O., Esmann, M., Malmendal, A. & Nielsen, N. C. (2006). NMR studies of the fifth transmembrane segment of Na⁺,K⁺-ATPase reveals a non-helical ion-binding region. FEBS Letters, 580, 4777-4783.

Sørensen, M. K., Vinding, M. S., Bakharev, O. N., Nesgaard, T., Jensen, O. & Nielsen, N. C. (2014). NMR Sensor for Onboard Ship Detection of Catalytic Fines in Marine Fuel Oil. Analytical Chemistry, 86(15), 7205-7208. https://doi.org/10.1021/ac5014496

Pedersen, M. Ø., Mikkelsen, K., Behrens, M. A., Pedersen, J. S., Enghild, J. J., Skrydstrup, T., Malmendal, A. & Nielsen, N. C. (2010). NMR reveals two-step association of Congo Red to amyloid β in low-molecular-weight aggregates. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 114(48), 16003-16010. https://doi.org/10.1021/jp108035y

Vosegaard, T. & Nielsen, N. C. (2014). NMR Investigations of the Structure and Dynamics of Antimicrobial Peptides: The Peptaibol Alamethicin. In F. Separovic & A. Naito (Eds.), Advances in Biological Solid-State NMR: Proteins and Membrane-Active Peptides (pp. 267-286). Royal Society of Chemistry. https://doi.org/10.1039/9781782627449-00267

Bertram, H. C., Bach Knudsen, K. E., Serena, A., Malmendal, A., Nielsen, N. C., Fretté, X. C. & Andersen, H. J. (2006). NMR-based metabonomic studies reveal changes in the biochemical profile of plasma and urine from pigs fed high fibre rye bread. British J. Nutr., 65, 955-962.

Bertram, H. C., Malmendal, A., Nielsen, N. C., Straadt, I. K., Larsen, T., Bach Knudsen, K. E. & Lærke, H. N. (2009). NMR-based metabonomics reveals that plasma betaine increases upon intake of high-fiber rye buns in hypercholesterolemic pigs. Molecular Nutrition & Food Research, 53, 1055-1062. https://doi.org/10.1002/mnfr.200800344

Jespersen, S. N., Bjarkam, C. R., Nyengaard, J. R., Mallar, C., Hansen, B., Vosegaard, T., Østergaard, L., Yablonskiy, DA., Nielsen, N. C. & Vestergaard-Poulsen, P. (2010). Neurite density from magnetic resonance diffusion measurements at ultrahigh field: comparison with light microscopy and electron microscopy. NeuroImage, 49(1), 205-16. https://doi.org/10.1016/j.neuroimage.2009.08.053

Kulminskaya, N. V., Yoshimura, Y., Runager, K., Sørensen, C. S., Bjerring, M., Andreasen, M., Otzen, D. E., Enghild, J. J., Nielsen, N. C. & Mulder, F. A. A. (2016). Near-complete ¹H, ¹³C, ¹⁵N resonance assignments of dimethylsulfoxide-denatured TGFBIp FAS1-4 A546T. Biomolecular N M R Assignments, 10(1), 25-29. https://doi.org/10.1007/s12104-015-9630-2

Runager, K., Underhaug, J., Basaiawmoit, R. V., Valnickova, Z., Kristensen, T., Otzen, D., Klintworth, G. K., Nielsen, N. C. & Enghild, J. J. (2009). Naturally Occurring Mutations Alter the Structure and Stability of the Fourth Fasciclin Domain of the Transforming Growth Factor Beta Induced Protein (TGFBIp). Investigative Ophthalmology & Visual Science, (E-Abstract 1016).

Sørensen, M. K., Bakharev, O. N., Jensen, O. & Nielsen, N. C. (2016). Natural abundant O-17 NMR in a 1.5-T Halbach magnet. Magnetic Resonance in Chemistry, 54(6), 510-512. https://doi.org/10.1002/mrc.4207

Underhaug, J., Koldsø, H., Runager, K., Nielsen, J. T., Sørensen, C. S., Kristensen, T., Otzen, D., Karring, H., Malmendal, A., Schiøtt, B., Enghild, J. J. & Nielsen, N. C. (2013). Mutation in transforming growth factor beta induced protein associated with granular corneal dystrophy type 1 reduces the proteolytic susceptibility through local structural stabilization. BBA General Subjects, 1834(12), 2812–2822. https://doi.org/10.1016/j.bbapap.2013.10.008

Straasø, L. A., Bjerring, M., Khaneja, N. & Nielsen, N. C. (2009). Multiple-oscillating-field techniques for accurate distance measurements by solid-state NMR. Journal of Chemical Physics, 130, 225103-1-225103-14. https://doi.org/10.1063/1.3147010

Bowen, S., Rybalko, O., Petersen, J. R., Vinding, M. S., Ullisch, M. G., Nielsen, N. C. & Ardenkjær-Larsen, J. H. (2017). Multi-Field Cryogen Free Dissolution-DNP at 3.35, 6.70, and 10.05 T. Abstract from 13th EUROMAR 2017, Warsaw.

Larsen, F. H., Jakobsen, H. J., Ellis, P. D. & Nielsen, N. C. (1998). Molecular dynamics from ²H Quadrupolar Carr-Purcell-Meiboom-Gill solid-state NMR spectroscopy . Chemical Physics Letters, 292, 467-473.

Andreasen, M., Nielsen, S. B., Mittag, T., Bjerring, M., Nielsen, J. T., Zhang, S., Nielsen, E. H., Jeppesen, M., Christiansen, G., Besenbacher, F., Dong, M., Nielsen, N. C., Skrydstrup, T. & Otzen, D. E. (2012). Modulation of fibrillation of hIAPP core fragments by chemical modification of the peptide backbone. B B A - Proteins and Proteomics, 1824(2), 274-85. https://doi.org/10.1016/j.bbapap.2011.10.014

Sarup, P., Petersen, S. M. M., Nielsen, N. C., Loeschcke, V. & Malmendal, A. (2016). Mild heat treatments induce long-term changes in metabolites associated with energy metabolism in Drosophila melanogaster. Biogerontology, 17(5), 873-882. Article 873. https://doi.org/10.1007/s10522-016-9657-5

Bjerring, M., Vosegaard, T., Malmendal, A. & Nielsen, N. C. (2003). Methodological development of solid-state NMR for characterization of membrane proteins. Concepts Magn. Reson., 18A, 111-129.

Pedersen, S. M., Samuelsson, A., Svensson, U., Rafter, J., Petterson, S., Nielsen, N. C., Bertram, H. C. & Malmendal, A. (2011). Metabonomic Effects of Strain and Delivering Method in Probiotic Fed Mice Induced with Mild Colitis. World Journal of Gastroenterology.

Pedersen, K. S., Kristensen, T. N., Loeschcke, V., Pedersen, B. O., Duus, J. Ø., Nielsen, N. C. & Malmendal, A. (2008). Metabolomic Signatures of Inbreeding at Benign and Stressful Temperatures in Drosophila melanogaster. Genetics, 180, 1233-1243. https://doi.org/10.1534/genetics.108.089144

Overgaard, J., Malmendal, A., Sørensen, J. G., Bundy, J. G., Loeschcke, V., Nielsen, N. C. & Holmstrup, M. (2007). Metabolomic profiling of rapid cold hardening and cold shock in Drosophila melanogaster. Journal of Insect Physiology, 53(12), 1218-1232. http://dx.doi.org/10.1016/j.jinsphys.2007.06.012

Malmendal, A., Overgaard, J., Bundy, J. G., Sørensen, J. G., Nielsen, N. C., Loeschcke, V. & Holmstrup, M. (2006). Metabolomic profiling of heat stress: hardening and recovery of homeostasis in Drosophila. American Journal of Physiology: Regulatory, Integrative and Comparative Physiology, 291(1), R205-12. http://ajpregu.physiology.org/cgi/content/abstract/291/1/R205

Malmendal, A., Sørensen, J. G., Overgaard, J., Holmstrup, M., Nielsen, N. C. & Loeschcke, V. (2013). Metabolomic analysis of the selection response of Drosophila melanogaster to environmental stress: are there links to gene expression and phenotypic traits? Naturwissenschaften, 100, 417–427.

Kirkegaard, K., Svane, A. S. P., Hindkjær, J. J., Nielsen, N. C. & Ingerslev, H. J. (2013). Metabolic profiles of spent culture media does not predict pregnancy outcome. Abstract from European Society of Human Reproduction and Embryology 29th annual meeting, London, United Kingdom.

Bertram, H. C., Kristensen, N. B., Vestergaard, M., Jensen, S. K., Sehested, J., Nielsen, N. C. & Malmendal, A. (2009). Metabolic characterization of rumen epithelial tissue from dairy calves fed different starter diets using ¹H NMR spectroscopy. Livestock Science, 120(1-2), 127-134. https://doi.org/10.1016/j.livsci.2008.05.001

Bayley, M., Overgaard, J., Høj, A. S., Malmendal, A., Nielsen, N. C., Holmstrup, M. & Wang, T. (2010). Metabolic changes during estivation in the common earthworm Aporrectodea caliginosa. Physiological and Biochemical Zoology, 83(3), 541-550. https://doi.org/10.1086/651459

Dorosz, J., Gofman, Y., Kolusheva, S., Otzen, D., Ben-Tal, N., Nielsen, N. C. & Jelinek, R. (2010). Membrane Interactions of Novicidin, a Novel Antimicrobial Peptide: Phosphatidylglycerol Promotes Bilayer Insertion. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 114(34), 11053-60. https://doi.org/10.1021/jp1052248

Bertelsen, K., Pedersen, J. M., Rasmussen, B. S., Skrydstrup, T., Nielsen, N. C. & Vosegaard, T. (2007). Membrane-bound conformation of peptaibols with methyl-deuterated a-amino isobutyric acids by ²H solid-state NMR spectroscopy. Journal of the American Chemical Society, 129, 14717-14723.

Bertelsen, K., Dorosz, J., Hansen, S. K., Nielsen, N. C. & Vosegaard, T. (2012). Mechanisms of Peptide-Induced Pore Formation in Lipid Bilayers Investigated by Oriented 31P Solid-State NMR Spectroscopy. P L o S One, 7(10). https://doi.org/10.1371/journal.pone.0047745

Calcutta, A., Jessen, C. M., Behrens, M. A., Oliveira, C. L. P., Renart, M. L., González-Ros, J. M., Otzen, D., Pedersen, J. S., Malmendal, A. & Nielsen, N. C. (2012). Mapping of unfolding states of integral helical membrane proteins by GPS-NMR and scattering techniques: TFE-induced unfolding of KcsA in DDM surfactant. B B A - Biomembranes, 1818(9), 2290-301. https://doi.org/10.1016/j.bbamem.2012.04.005

Dusold, S., Klaus, E., Sebald, A., Bak, M. & Nielsen, N. C. (1997). Magnitudes and Relative Orientations of Chemical Shielding, Dipolar and J Coupling Tensors for Isolated 31P-31P Spin Pairs Determined by Iterative Fitting of 31P MAS NMR Spectra. Journal of the American Chemical Society, 119, 7121-7129.

Rasmussen, J. T., Hohwy, M., Jakobsen, H. J. & Nielsen, N. C. (1999). Magnitude; absolute orientation of ¹H chemical shielding tensors in polycrystalline powders. A ¹H CRAMPS NMR study of KH₂PO₄. Chemical Physics Letters, 314, 239-245.

Sørensen, M. K., Bakharev, O., Jensen, O., Jakobsen, H. J., Skibsted, J. & Nielsen, N. C. (2014). Magic-angle spinning solid-state multinuclear NMR on low-field instrumentation. Journal of Magnetic Resonance, 238, 20-25. https://doi.org/10.1016/j.jmr.2013.10.015

Jain, S. K., Nielsen, A. B., Hiller, M., Handel, L., Ernst, M., Oschkinat, H., Akbey, Ü. & Nielsen, N. C. (2014). Low-power polarization transfer between deuterons and spin-1/2 nuclei using adiabatic (RESPIRATION)CP in solid-state NMR. Physical Chemistry Chemical Physics, 16(7), 2827-30. https://doi.org/10.1039/c3cp54419b

Nielsen, A. B., Jain, S. K. & Nielsen, N. C. (2011). Low-power homonuclear dipolar recoupling using supercycled symmetry-based and exponentially-modulated pulse sequences. Chemical Physics Letters, 503, 310-315.

Displaying results 101 to 150 out of 299

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Revised 17.04.2023

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Lise Refstrup Linnebjerg Pedersen