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Interdisciplinary Nanoscience Center

Danish Center for Ultrahigh Field NMR Spectroscopy

Publications

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Zhao, B., Xu, P., Jiang, L., Paaske, B., Kromann-Hansen, T., Jensen, J. K., Sørensen, H. P., Liu, Z., Nielsen, J. T., Christensen, A., Hosseini, M., Sørensen, K. K., Nielsen, N. C., Jensen, K. J., Huang, M. & Andreasen, P. A. (2014). A cyclic peptidic serine protease inhibitor: increasing affinity by increasing Peptide flexibility. PLOS ONE, 9(12), Article e115872. https://doi.org/10.1371/journal.pone.0115872

Zhang, S., Andreasen, M., Nielsen, J. T., Liu, L., Nielsen, E. H., Song, J., Ji, G., Sun, F., Skrydstrup, T., Besenbacher, F., Nielsen, N. C., Otzen, D. E. & Dong, M. (2013). Coexistence of ribbon and helical fibrils originating from hIAPP20-29 revealed by quantitative nanomechanical atomic force microscopy. Proceedings of the National Academy of Sciences (PNAS), 110(8), 2798-2803. https://doi.org/10.1073/pnas.1209955110

Young, J. F., Larsen, L. B., Malmendal, A., Nielsen, N. C., Straadt, I. K., Oksbjerg, N. & Bertram, H. C. (2010). Creatine-induced activation of antioxidative defence in myotube cultures revealed by explorative NMR-based metabonomics and proteomics. Journal of the international society of sports nutrition, 7(9). https://doi.org/10.1186/1550-2783-7-9

Yang, C., Vu Quang, H., Husum, D. M. U., Tingskov, S. J. H., Vinding, M. S., Nielsen, T., Song, P., Nielsen, N. C., Nørregaard, R. & Kjems, J. (2017). Theranostic poly(lactic-co-glycolic acid) nanoparticle for magnetic resonance/infrared fluorescence bimodal imaging and efficient siRNA delivery to macrophages and its evaluation in a kidney injury model. Nanomedicine: Nanotechnology, Biology and Medicine, 13(8), 2451–2462. https://doi.org/10.1016/j.nano.2017.08.007

Würtz, P., Permi, P., Nielsen, N. C. & Sørensen, O. W. (2008). Clean HMBC: Suppression of strong-coupling induced artifacts in HMBC spectra. Journal of Magnetic Resonance, 194(1), 89-98. https://doi.org/10.1016/j.jmr.2008.06.002

Wittenborn, T., Nielsen, T., Nygaard, J. V., Larsen, E. K. U., Thim, T., Rydtoft, L. M., Vorup-Jensen, T., Kjems, J., Nielsen, N. C., Horsman, M. R. & Falk, E. (2012). Ultra-High-Field DCE-MRI of Angiogenesis in a Novel Angiogenesis Mouse Model. Journal of Magnetic Resonance Imaging, 35(3), 703-710. https://doi.org/10.1002/jmri.22855

Wittenborn, T. R., Larsen, E. K. U., Nielsen, T., Rydtoft, L. M., Hansen, L., Nygaard, J. V., Vorup-Jensen, T., Kjems, J., Horsman, M. R. & Nielsen, N. C. (2014). Accumulation of nano-sized particles in a murine model of angiogenesis. Biochemical and Biophysical Research Communications, 443(2), 470-6. https://doi.org/10.1016/j.bbrc.2013.11.127

Wili, N., Nielsen, A. B., Völker, L. A., Schreder, L., Nielsen, N. C., Jeschke, G. & Tan, K. O. (2022). Designing broadband pulsed dynamic nuclear polarization sequences in static solids. Science Advances, 8(28), Article eabq0536. https://doi.org/10.1126/sciadv.abq0536

Wili, N., Nielsen, A. B., Carvalho, J. P. & Nielsen, N. C. (2024). Observation of dynamic nuclear polarization echoes. Science Advances, 10(42), Article eadr2420. https://doi.org/10.1126/sciadv.adr2420

Wei, D., Akbey, U., Jensen, B. P., Oschkinat, H., Reif, B., Bjerring, M. & Nielsen, N. C. (2011). Optimal 2H rf pulses and 2H-13C cross-polarization methods for solid-state 2H MAS NMR of perdeuterated proteins. The Journal of Physical Chemistry Letters, 2(11), 1289-1294. https://doi.org/10.1021/jz200511b

Weber, M., Schneider, D., Prodöhl, A., Dreher, C., Becker, C., Underhaug, J., Svane, A. S. P., Malmendal, A., Nielsen, N. C. & Otzen, D. (2011). SDS-facilitated in vitro formation of a transmembrane B-type cytochrome is mediated by changes in local pH. Journal of Molecular Biology, 407(4), 594-606. https://doi.org/10.1016/j.jmb.2011.02.005

Wang, J., Norgaard, T., Kisielius, V., Wili, N., Muhmood, A., Wang, D., Carvalho, P. N., Nielsen, N. C. & Wu, S. (2024). Exploring the intensified catalytic role of biochar in facilitating advanced oxidation of tebuconazole. Chemical Engineering Journal, 498, Article 155025. https://doi.org/10.1016/j.cej.2024.155025

Waagner, D., Heckmann, L.-H., Malmendal, A., Nielsen, N. C., Holmstrup, M. & Bayley, M. (2010). Hsp70 expression and metabolite composition in response to short-term thermal changes in Folsomia candida (Collembola). Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology, 157, 177-183. https://doi.org/10.1016/j.cbpa.2010.06.171

Vu-Quang, H., Vinding, M. S., Nielsen, T., Ullisch, M. G., Nielsen, N. C. & Kjems, J. (2016). Theranostic Tumor Targeted Nanoparticles Combining Drug Delivery with Dual Near Infrared and (19)F Magnetic Resonance Imaging Modalities. Nanomedicine: Nanotechnology, Biology and Medicine, 12(7), 1873-1884. https://doi.org/10.1016/j.nano.2016.04.010

Vu-Quang, H., Vinding, M. S., Nielsen, T., Ullisch, M. G., Nielsen, N. C., Nguyen, D. T. & Kjems, J. (2019). Pluronic F127-folate coated super paramagenic iron oxide nanoparticles as contrast agent for cancer diagnosis in magnetic resonance imaging. Polymers, 11(4), Article 743. https://doi.org/10.3390/polym11040743

Vu-Quang, H., Vinding, M. S., Jakobsen, M., Song, P., Dagnaes-Hansen, F., Nielsen, N. C. & Kjems, J. (2019). Imaging rheumatoid arthritis in mice using combined near infrared and ¹⁹F magnetic resonance modalities. Scientific Reports, 9, Article 14314. https://doi.org/10.1038/s41598-019-50043-0

Vu Quang, H., Vinding, M. S., Xia, D., Nielsen, T., Ullisch, M. G., Dong, M., Nielsen, N. C. & Kjems, J. (2016). Chitosan-coated Poly(lactic-co-glycolic acid) Perfluorooctyl Bromide Nanoparticles for Cell Labeling in 19F Magnetic Resonance Imaging. Carbohydrate Polymers, 136, 936-944. https://doi.org/10.1016/j.carbpol.2015.09.076

Vosegaard, T. & Nielsen, N. C. (2004). Improved pulse sequences for pure exchange solid-state NMR spectroscopy. Magn. Reson. Chem., 42(2), 285-290.

Vosegaard, T., Malmendal, A. & Nielsen, N. C. (2002). The flexibility of SIMPSON and SIMMOL for numerical simulations in solid- and liquid-state NMR spectroscopy. Chem. Monthly, 133, 1555-1574.

Vosegaard, T. & Nielsen, N. C. (2002). Towards high-resolution solid-state NMR on large uniformly ¹⁵N- and [¹³C, ¹⁵N]-labeled membrane proteins in oriented lipid bilayers. J. Biomol. NMR, 22, 225-247.

Vosegaard, T., Kehlet, C. T., Khaneja, N., Glaser, S. J. & Nielsen, N. C. (2005). Improved excitation schemes for multiple-quantum magic-angle spinning for quadrupolar nuclei designed using optimal control theory. Journal of the American Chemical Society, 127, 13768-13769.

Vosegaard, T., Kamihira-Ishijima, M., Watts, A. & Nielsen, N. C. (2008). Helix conformations in 7TM membrane proteins determined using oriented-sample solid-state NMR with multiple residue-specific ¹⁵N labeling. Biophysical Journal, 94, 241-250. https://doi.org/10.1529/biophysj.107.116004

Vosegaard, T., Bertelsen, K., Pedersen, J. M., Thøgersen, L., Schiøtt, B., Tajkhorshid, E., Skrydstrup, T. & Nielsen, N. C. (2008). Resolution Enhancement in Solid-State NMR of Oriented Membrane Proteins by Anisotropic Differential Linebroadening. Journal of the American Chemical Society, 130, 5028-5029.

Vosegaard, T. & Nielsen, N. C. (2009). Defining the sampling space in multidimensional NMR experiments: What should the maximum sampling time be? Journal of Magnetic Resonance, 199(2), 146-158. https://doi.org/10.1016/j.jmr.2009.04.007

Vosegaard, T. & Nielsen, N. C. (2009). Defining the Sampling Space in Multidimensional NMR Experiments: What should the Maximum Sampling Time Be?. Poster session presented at 50th Experimental NMR Conference (ENC), Asilomar, United States.

Vosegaard, T., Larsen, F. H., Jakobsen, H. J., Ellis, P. D. & Nielsen, N. C. (1997). Sensitivity-Enhanced Multiple-Quantum MAS NMR of Half-Integer Quadrupolar Nuclei. Journal of the American Chemical Society, 119, 9055-9056.

Vosegaard, T., Tosner, Z. & Nielsen, N. C. (2010). Numerical Simulations in Solid-State NMR with SIMPSON. In M. A.E. & T. Polenova (Eds.), Solid-State NMR of Biopolymers (pp. 377-394). John Wiley & Sons Ltd.

Vosegaard, T., Tosner, Z. & Nielsen, N. C. (2010). Numerical Simulations in Solid-State NMR with SIMPSON. In Encyclopedia of Magnetic Resonance Wiley. https://doi.org/10.1002/9780470034590.emrstm1097

Vosegaard, T. & Nielsen, N. C. (2014). NMR Investigations of the Structure and Dynamics of Antimicrobial Peptides: The Peptaibol Alamethicin. In F. Separovic & A. Naito (Eds.), Advances in Biological Solid-State NMR: Proteins and Membrane-Active Peptides (pp. 267-286). Royal Society of Chemistry. https://doi.org/10.1039/9781782627449-00267

Vinther, J. M., Nielsen, A. B., Bjerring, M., van Eck, E., Kentgens, A., Khaneja, N. & Nielsen, N. C. (2012). Refocused continuous-wave decoupling: A new approach to heteronuclear dipolar decoupling in solid-state NMR spectroscopy. Journal of Chemical Physics, 137(21), 214202. https://doi.org/10.1063/1.4768953

Vinther, J. M., Khaneja, N. & Nielsen, N. C. (2013). Robust and Efficient 19F Heteronuclear Dipolar Decoupling using Refocused Continuous-Wave Rf Irradiation. Journal of Magnetic Resonance. https://doi.org/10.1016/j.jmr.2012.11.003

Vinther, J. M. & Nielsen, N. C. (2011). Notes on NMR spectroscopy: an introduction to the principles of NMR spectroscopy. Kemisk Institut, Aarhus Universitet.

Vinding, M. S., Maximov, I., Tosner, Z., Jespersen, S. N. & Nielsen, N. C. (2011). Optimal Control Theory in Magnetic Resonance Imaging: Global Optima for 2DRF pulses. Poster session presented at 32nd Annual Danish NMR Meeting, Korsør, Denmark.

Vinding, M. S., Maximov, I., Tosner, Z. & Nielsen, N. C. (2012). Fast Numerical Design of Spatial-Selective RF Pulses in MRI using Krotov and Quasi-Newton Based Optimal Control Methods. Journal of Chemical Physics, 137.

Vinding, M. S., Maximov, I., Tosner, Z. & Nielsen, N. C. (2012). Fast Optimal Control in MRI. Poster session presented at QUAINT, Southampton, United Kingdom.

Vinding, M. S., Laustsen, C., Maximov, I., Søgaard, L. V., Ardenkjær-Larsen, J. H. & Nielsen, N. C. (2013). Dynamic nuclear polarization and optimal control spatial-selective 13C MRI and MRS. Journal of Magnetic Resonance, 227, 57-61. https://doi.org/10.1016/j.jmr.2012.12.002

Vinding, M. S., Guérin, B. & Nielsen, N. C. (2014). Constraining local and global SAR in MRI pulse design. Poster session presented at 35th Danish NMR Meeting, Denmark.

Vinding, M. S., Maximov, I., Tosner, Z. & Nielsen, N. C. (2013). Fast monotonic convergent optimal control algorithm for 2D RF pulses mitigating B0 and B1 inhomogeneities. Poster session presented at ISMRM 2013, Salt Lake City, United States.

Vinding, M. S., Nielsen, N. C., Suter, D. & Maximov, I. (2015). Computational framework “blOCh” for a multidimensional RF pulse design using optimal control theory. Poster session presented at European Society for Magnetic Resonance in Medicine and Biology, Edinburgh, United Kingdom.

Vinding, M. S., Brenner, D., Tse, D. H. Y., Stöcker, T., Nielsen, N. C., Suter, D. & Maximov, I. (2015). Fast design of 2D spatially selective RF pulses for parallel transmit at ultra-high fields. Poster session presented at ESMRMB, Edinburgh, United Kingdom.

Vinding, M. S., Brenner, D., Tse, D. H. Y., Stöcker, T., Nielsen, N. C., Suter, D. & Maximov, I. (2015). Accelerated design of 2D spatially selective RF pulses by a quasi-Newton memory-limited algorithm in the “blOCh” framework. Poster session presented at ESMRMB, Edinburgh, United Kingdom.

Vinding, M. S., Guérin, B., Vosegaard, T. & Nielsen, N. C. (2017). Local SAR, global SAR, and power-constrained large-flip- angle pulses with optimal control and virtual observation points. Magnetic Resonance in Medicine, 77(1), 374–384. https://doi.org/10.1002/mrm.26086

Vinding, M. S., Guérin, B., Vosegaard, T. & Chr. Nielsen, N. (2019). Erratum to: Local SAR, global SAR, and power-constrained large-flip-angle pulses with optimal control and virtual observation points: SAR Constrained Large-Flip-Angle Pulses (Magnetic Resonance in Medicine, (2017), 77, 1, (374-384), 10.1002/mrm.26086). Magnetic Resonance in Medicine, 81(3), 2195-2195. https://doi.org/10.1002/mrm.27581

Vestergaard-Poulsen, P., Wegener, G., Hansen, B., Bjarkam, C. R., Blackband, S. J., Nielsen, N. C. & Jespersen, S. N. (2011). Diffusion-weighted MRI and quantitative biophysical modeling of hippocampal neurite loss in chronic stress. P L o S One, 6(7), e20653. https://doi.org/10.1371/journal.pone.0020653

Vad, B. S., Thomsen, L. A. H., Bertelsen, K., Franzmann, M., Pedersen, J. M., Nielsen, S. B., Vosegaard, T., Valnickova, Z., Skrydstrup, T., Enghild, J. J., Wimmer, R., Nielsen, N. C. & Otzen, D. (2010). Divorcing folding from function: how acylation affects the membrane-perturbing properties of an antimicrobial peptide. B B A - Proteins and Proteomics, 1804(4), 806-20. https://doi.org/10.1016/j.bbapap.2009.12.006

Vad, B. S., Bertelsen, K., Johansen, C. H., Pedersen, J. M., Skrydstrup, T., Nielsen, N. C. & Otzen, D. E. (2010). Pardaxin permeabilizes vesicles more efficiently by pore formation than by disruption. Biophysical Journal, 98(4), 576-85. https://doi.org/10.1016/j.bpj.2009.08.063

Untidt, T., Glaser, S. J., Griesinger, C. & Nielsen, N. C. (1999). Unitary bounds; controllability of quantum evolution in NMR spectroscopy. Mol. Phys., 96, 1739-1744.

Untidt, T., Schulte-Herbrüggen, T., Sørensen, O. W. & Nielsen, N. C. (1999). Optimum α/β-HSQC pulse sequences for coherence-order-; spin-state-selective transfer in I₂S spin systems. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 103, 8921-8926.

Untidt, T. S. & Nielsen, N. C. (2000). Analytical unitary bounds on quantum dynamics: Design of optimum NMR experiments in two-spin-1/2 systems. Journal of Chemical Physics, 113, 8464-8471.

Untidt, T. S. & Nielsen, N. C. (2002). Closed solution to the Baker-Campbell-Hausdorff problem: exact effective Hamiltonian theory for analysis of nuclear-magnetic resonance experiments. Physical Review E, 65(2).

Displaying results 1 to 50 out of 299

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Revised 17.04.2023

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Lise Refstrup Linnebjerg Pedersen