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Interdisciplinary Nanoscience Center

Danish Center for Ultrahigh Field NMR Spectroscopy

Publications

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Vad, B. S., Bertelsen, K., Johansen, C. H., Pedersen, J. M., Skrydstrup, T., Nielsen, N. C. & Otzen, D. E. (2010). Pardaxin permeabilizes vesicles more efficiently by pore formation than by disruption. Biophysical Journal, 98(4), 576-85. https://doi.org/10.1016/j.bpj.2009.08.063

Laustsen, C., Ringgaard, S., Pedersen, M. & Nielsen, N. C. (2010). Quadrupolar-coupling-specific binomial pulse sequences for in vivo(23)Na NMR and MRI. Journal of Magnetic Resonance, 206, 139-146. https://doi.org/10.1016/j.jmr.2010.06.017

Straasø, L. A. & Nielsen, N. C. (2010). Recoupling of native homonuclear dipolar couplings in magic-angle-spinning solid-state NMR by the double-oscillating field technique. Journal of Chemical Physics, 133, 064501.

Petersen, S. V., Thøgersen, I., Valnickova, Z., Nielsen, M. S., Petersen, J. S., Poulsen, E. T., Jacobsen, C., Oury, T. D., Moestrup, S. K., Crapo, J. D., Nielsen, N. C., Kristensen, T. & Enghild, J. J. (2010). The concentration of extracellular superoxide dismutase in plasma is maintained by LRP-mediated endocytosis. Free Radical Biology & Medicine, 49(5), 894-9. https://doi.org/10.1016/j.freeradbiomed.2010.06.019

Pedersen, S. M., Nielsen, N. C., Andersen, H. J., Olsson, J., Simrén, M., Öhman, L., Svensson, U., Malmendal, A. & Bertram, H. C. (2010). The Serum Metabolite Response to Diet Intervention with Probiotic Acidified Milk in Irritable Bowel Syndrome Patients is indistiguishanble from that of Non-Probiotic Acidified Milk by 1H NMR-based Metabonomic Analysis. Nutrients, 2, 1141-1155.

Pedersen, S. M., Rafter, J., Petterson, S., Samuelsson, A., Svensson, U., Nielsen, N. C., Bertram, H. C. S. & Malmendal, A. (2009). 1H NMR Liquid State Metabonomic Analysis of Probiotic-Host Interaction in an Irritable Bowel Syndrome Mouse Model. Poster session presented at 30th Danish NMR Meeting, København, Denmark.

Bertelsen, K., Jensen, B. P., Nielsen, N. C. & Vosegaard, T. (2009). A dynamic View on Membrane-Bound Peptides by Combined 15N and 2H Oriented-Sample Solid-State NMR. Poster session presented at 50th Experimental NMR Conference (ENC), Asilomar, CA, United States.

Hjørringgaard, C. U., Pedersen, J. M., Vosegaard, T., Nielsen, N. C. & Skrydstrup, T. (2009). An automatic solid-phase synthesis of peptaibols. Journal of Organic Chemistry, 74, 1329–1332.

Hjørringgaard, C. U., Pedersen, J. M., Vosegaard, T., Nielsen, N. C. & Skrydstrup, T. (2009). An Automatic Solid-Phase Synthesis of Peptaibols. Abstract from 2nd Modern Solid Phase Peptide Synthesis & Its Applications Symposium, Gold Coast, Australia.

Huynh, T. H. V., Mantel, M., Mikkelsen, K., Lindhardt, A. T., Nielsen, N. C., Otzen, D. & Skrydstrup, T. (2009). A Versatile Approach to β-Amyloid Fibril-Binding Compounds Exploiting the Shirakawa/Hayashi Protocol for trans-Alkene Synthesis. Organic Letters, 11, 999-1002.

Vosegaard, T. & Nielsen, N. C. (2009). Defining the sampling space in multidimensional NMR experiments: What should the maximum sampling time be? Journal of Magnetic Resonance, 199(2), 146-158. https://doi.org/10.1016/j.jmr.2009.04.007

Vosegaard, T. & Nielsen, N. C. (2009). Defining the Sampling Space in Multidimensional NMR Experiments: What should the Maximum Sampling Time Be?. Poster session presented at 50th Experimental NMR Conference (ENC), Asilomar, United States.

Straasø, L. A., Bjerring, M., Khaneja, N. & Nielsen, N. C. (2009). Four-Oscillating-Fiels Technique for Accurate Distance Measurement by Solid-State NMR. Poster session presented at 50th Experimental NMR Conference (ENC), Asilomar, CA, United States.

Svane, A. S. P., Sørensen, J., Schiøtt, H. B. & Nielsen, N. C. (2009). Glucagon - A model for amyloid fibril formation. Poster session presented at 7th Annual iNano Symposium, Århus, Denmark.

Dittmer, J., Thøgersen, L., Underhaug, J., Bertelsen, K., Vosegaard, T., Pedersen, J. M., Schiøtt, H. B., Tajkhorshid, E., Skrydstrup, T. & Nielsen, N. C. (2009). Incorporation of Antimicrobial Peptides into Membranes: A Combined Liquid-State NMR and Molecular Dynamics Study of Alamethicin in DMPC/DHPC Bicelles. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 113(19), 6928-6937. https://doi.org/10.1021/jp811494p

Bertram, H. C., Kristensen, N. B., Vestergaard, M., Jensen, S. K., Sehested, J., Nielsen, N. C. & Malmendal, A. (2009). Metabolic characterization of rumen epithelial tissue from dairy calves fed different starter diets using ¹H NMR spectroscopy. Livestock Science, 120(1-2), 127-134. https://doi.org/10.1016/j.livsci.2008.05.001

Straasø, L. A., Bjerring, M., Khaneja, N. & Nielsen, N. C. (2009). Multiple-oscillating-field techniques for accurate distance measurements by solid-state NMR. Journal of Chemical Physics, 130, 225103-1-225103-14. https://doi.org/10.1063/1.3147010

Runager, K., Underhaug, J., Basaiawmoit, R. V., Valnickova, Z., Kristensen, T., Otzen, D., Klintworth, G. K., Nielsen, N. C. & Enghild, J. J. (2009). Naturally Occurring Mutations Alter the Structure and Stability of the Fourth Fasciclin Domain of the Transforming Growth Factor Beta Induced Protein (TGFBIp). Investigative Ophthalmology & Visual Science, (E-Abstract 1016).

Bertram, H. C., Malmendal, A., Nielsen, N. C., Straadt, I. K., Larsen, T., Bach Knudsen, K. E. & Lærke, H. N. (2009). NMR-based metabonomics reveals that plasma betaine increases upon intake of high-fiber rye buns in hypercholesterolemic pigs. Molecular Nutrition & Food Research, 53, 1055-1062. https://doi.org/10.1002/mnfr.200800344

Bretschneider, C. O., Nielsen, N. C., Karabanov, A. & Kockenberger, W. (2009). Optimal Control Design of Parahydrogen Induced Polarisation Experiments. Poster session presented at 50th Experimental NMR Conference (ENC), Asilomar, United States.

Kehlet, C., Tosner, Z., Nielsen, A. B., Bjerring, M., Nielsen, J. T., Vinding, M. S., Vosegaard, T., Glaser, S. J., Khaneja, N. & Nielsen, N. C. (2009). Optimal Control in NMR Spectroscopy: Implementation into SIMPSON and Novel Experiments for Biological Solid-State NMR. Poster session presented at 50th Experimental NMR Conference (ENC), Asilomar, CA, United States.

Tosner, Z., Vosegaard, T., Kehlet, C., Khaneja, N., Glaser, S. & Nielsen, N. C. (2009). Optimal control in NMR spectroscopy: Numerical implementation in SIMPSON. Journal of Magnetic Resonance, 197, 120-134. https://doi.org/10.1016/j.jmr.2008.11.020

Runager, K., Garcia-Castellanos, R., Valnickova, Z., Kristensen, T., Nielsen, N. C., Klintworth, G. K., Gomis-Ruth, F. X. & Enghild, J. J. (2009). Purification, crystallization and preliminary X-raydiffraction of wild-type and mutant recombinanthuman transforming growth factor b-inducedprotein (TGFBIp). Acta Crystallographica. Section F: Structural Biology and Crystallization Communications Online, 65, 299-303.

Bertelsen, K., Jensen, B. P., Thøgersen, L., Tajkhorshid, E., Schiøtt, H. B., Skrydstrup, T., Nielsen, N. C. & Vosegaard, T. (2009). Residue-Specific Information about the Dynamics of Antimicrobial Peptides from ¹H−¹⁵N and ²H Solid-State NMR Spectroscopy. Journal of the American Chemical Society, 131(51), 18335–18342. https://doi.org/10.1021/ja908604u

Goswami, M., Madhu, P. K., Dittmer, J., Nielsen, N. C. & Ganapathy, S. (2009). Sensitivity enhancement of ²⁹Si double-quantum dipolar recoupling spectroscopy by Carr-Purcell-Meiboom-Gill acquisition method. Chemical Physics Letters, 478, 287-291.

Svane, A. S. P., Jahn, K., Malmendal, A., Dittmer, J. & Nielsen, N. C. (2009). Studying the Kenitics of Amyloid Formation using Liquid-State NMR: Early Stages of Glucagon Fibril Formation. Poster session presented at 50th Experimental NMR conference (ENC), Asilomar, CA, United States.

Nielsen, A. B., Bjerring, M., Nielsen, J. T. & Nielsen, N. C. (2009). Symmetry-based dipolar recoupling by optimum control: Band selective experiments for assignment of solid-state NMR spectra of proteins. Journal of Chemical Physics, 131, 025101-1-025101-11. https://doi.org/10.1063/1.3157737

Mittag, T., Nielsen, N. C., Otzen, D. & Skrydstrup, T. (2009). Synthesis of a Ketomethylene Isostere of the Fibrillating Peptide SNNFGAILSS. Journal of Organic Chemistry, 74, 7955-7957.

Hjørringgaard, C. U., Vad, B. S., Nielsen, S. B., Nielsen, N. C., Otzen, D. & Skrydstrup, T. (2009). Templated Multimers of Antimicrobial Peptides. Poster session presented at 8th Australian Peptide Conference, Peptides - Tools, Targets & Therapeutics , Australia.

Nielsen, J. T., Bjerring, M., Jeppesen, M., Pedersen, R. O., Pedersen, J. M., Hein, K. L., Vosegaard, T., Skrydstrup, T., Otzen, D. & Nielsen, N. C. (2009). Unique Identification of Supramolecular Structures in Amyloid Fibrils by Solid-State NMR. Poster session presented at 50th Experimental NMR Conference (ENC), Asilomar, CA, United States.

Nielsen, J. T., Bjerring, M., Jeppesen, M., Pedersen, R. O., Pedersen, J. M., Hein, K. L., Vosegaard, T., Skrydstrup, T., Otzen, D. & Nielsen, N. C. (2009). Unique identification of supramolecular structures in amyloid fibrils by solid-state NMR spectroscopy. Angewandte Chemie International Edition, 48, 2118-2121.

Hjørringgaard, C. U., Pedersen, J. M., Vosegaard, T., Nielsen, N. C. & Skrydstrup, T. (2008). A Highly Time-saving and Efficient Automatic Solid Phase Synthesis of Peptaibols. Poster session presented at Organic Chemistry and Scientific Presentation Techniques. OCHEM SCHOOL, Sandbjerg, Denmark.

Hjørringgaard, C. U., Pedersen, J. M., Vosegaard, T., Nielsen, N. C. & Skrydstrup, T. (2008). A Highly Time-saving and Efficient Automatic Solid Phase Synthesis of Peptaibols. Poster session presented at iNANO Autumn School, Fuglsø Centret, Denmark.

Hagemann, O., Bjerring, M., Nielsen, N. C. & Krebs, F. C. (2008). All solution processed tandem polymer solar cells based on thermocleavable materials. Solar Energy Materials & Solar Cells, 92(11), 1327-1335. https://doi.org/10.1016/j.solmat.2008.05.005

Mantel, M., Søbjerg, L. S., Huynh, T. H. V., Ebran, J.-P., Lindhardt, A. T., Nielsen, N. C. & Skrydstrup, T. (2008). An Expedient Synthesis of the Fibril Binding Compound FSB via Sequential Pd-Catalyzed Coupling Reactions. Journal of Organic Chemistry, 73(9), 3570–3573. https://doi.org/10.1021/jo7026189

Bjerring, M., Nielsen, J. S., Siu, A., Nielsen, N. C. & Krebs, F. C. (2008). An explanation for the high stability of polycarboxythiophenes in photovoltaic devices - A by solid-state NMR dipolar recoupling study. Solar Energy Materials & Solar Cells, 92, 772-784. https://doi.org/10.1016/j.solmat.2007.11.008

Pedersen, S. M., Svensson, U., Andersen, H. J., Nielsen, N. C., Malmendal, A. & Bertram, H. C. (2008). A nutrigenomic appraoch for the action of probiotic bacteria - A NMR-metabonomic study of biofluids and tissues. Poster session presented at 29th Danish NMR Meeting, Nyborg, Denmark.

Würtz, P., Permi, P., Nielsen, N. C. & Sørensen, O. W. (2008). Clean HMBC: Suppression of strong-coupling induced artifacts in HMBC spectra. Journal of Magnetic Resonance, 194(1), 89-98. https://doi.org/10.1016/j.jmr.2008.06.002

Mittag, T., Christensen, K. L., Lindsay, K., Nielsen, N. C. & Skrydstrup, T. (2008). Direct Entry to Peptidyl Ketones via SmI2-Mediated C−C Bond Formation with Readily Accessible N-Peptidyl Oxazolidinones. Journal of Organic Chemistry, 73(3), 1088–1092. https://doi.org/10.1021/jo702286b

Svane, A. S. P., Jahn, K., Deva, T., Malmendal, A., Otzen, D., Dittmer, J. & Nielsen, N. C. (2008). Early Stages of Amyloid Fibril Formation Studied by Liquid-State NMR: The Peptide Hormone Glucagon. Biophysical Journal, 95(1), 366 – 377. https://doi.org/10.1529/biophysj.107.122895

Slotsbo, S., Maraldo, K., Malmendal, A., Nielsen, N. C. & Holmstrup, M. (2008). Freeze tolerance and accululation of cryoprotectants in the enchytraeid Enchytraeus albidus. Poster session presented at The annual main meeting of the Society for Experimental Biology - SEB, Marseille, France.

Slotsbo, S., Maraldo, K., Malmendal, A., Nielsen, N. C. & Holmstrup, M. (2008). Freeze tolerance and accumulation of cryoprotectants in the enchytraeid Enchytraeus albidus (Oligochaeta) from Greenland and Europe. Cryobiology, 57, 286-291.

Vosegaard, T., Kamihira-Ishijima, M., Watts, A. & Nielsen, N. C. (2008). Helix conformations in 7TM membrane proteins determined using oriented-sample solid-state NMR with multiple residue-specific ¹⁵N labeling. Biophysical Journal, 94, 241-250. https://doi.org/10.1529/biophysj.107.116004

Pedersen, K. S., Kristensen, T. N., Loeschcke, V., Pedersen, B. O., Duus, J. Ø., Nielsen, N. C. & Malmendal, A. (2008). Metabolomic Signatures of Inbreeding at Benign and Stressful Temperatures in Drosophila melanogaster. Genetics, 180, 1233-1243. https://doi.org/10.1534/genetics.108.089144

Maximov, I., Tosner, Z. & Nielsen, N. C. (2008). Optimal control design of NMR and dynamic nuclear polarization experiments using monotonically convergent algorithms. Journal of Chemical Physics, 128, 184505. https://doi.org/10.1063/1.2903458

Thøgersen, L., Schiøtt, B., Vosegaard, T., Nielsen, N. C. & Tajkhorshid, E. (2008). Peptide Aggregation and Pore Formation in a Lipid Bilayer: A Combined Coarse-Grained and All Atom Molecular Dynamics Study. Biophysical Journal, 95(9), 4337-4347. https://doi.org/10.1529/biophysj.108.133330

Nielsen, K. M. E., Dittmer, J., Malmendal, A. & Nielsen, N. C. (2008). Quantitative Analysis of Constituents in Heavy Fuel Oil by 1H Nuclear Magnetic Resonance (NMR) Spectroscopy and Multivariate Data Analysis. Energy & Fuels, 22(6), 4070–4076. https://doi.org/10.1021/ef800539g

Vosegaard, T., Bertelsen, K., Pedersen, J. M., Thøgersen, L., Schiøtt, B., Tajkhorshid, E., Skrydstrup, T. & Nielsen, N. C. (2008). Resolution Enhancement in Solid-State NMR of Oriented Membrane Proteins by Anisotropic Differential Linebroadening. Journal of the American Chemical Society, 130, 5028-5029.

Petersen, S. V., Kristensen, T., Petersen, J. S., Ramsgaard, L., Oury, T., Crapo, J., Nielsen, N. C. & Enghild, J. J. (2008). The folding of human active and inactive extracellular superoxide dismutase is an intracellular event. Journal of Biological Chemistry, 283(22), 15031. https://doi.org/10.1074/jbc.M801548200

Petersen, S. V., Kristensen, T., Petersen, J. S., Ramsgaard, L., Oury, T. D., Crapo, J. D., Nielsen, N. C. & Enghild, J. J. (2008). The folding of human aEC-sod and iEC-sod is an intracellular event. Journal of Biological Chemistry.

Displaying results 151 to 200 out of 299

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Revised 17.04.2023

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Lise Refstrup Linnebjerg Pedersen