Publications

We publish in a broad array of journals… To view list of publications related to nanoscience/technology by scientists associated with iNANO

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Venø, M. T., Hansen, T. B., Venø, S. T., Clausen, B. H., Grebing, M., Finsen, B., Holm, I. E. & Kjems, J. (2015). Spatio-temporal regulation of circular RNA expression during porcine embryonic brain development. Genome Biology, 16, Article 16:245. https://doi.org/10.1186/s13059-015-0801-3

Venø, M. T., Reschke, C. R., Morris, G., Connolly, N. M. C., Su, J., Yan, Y., Engel, T., Jimenez-Mateos, E. M., Harder, L. M., Pultz, D., Haunsberger, S. J., Pal, A., Heller, J. P., Campbell, A., Langa, E., Brennan, G. P., Conboy, K., Richardson, A., Norwood, B. A. ... Henshall, D. C. (2020). A systems approach delivers a functional microRNA catalog and expanded targets for seizure suppression in temporal lobe epilepsy. Proceedings of the National Academy of Sciences (PNAS), 117(27), 15977-15988. https://doi.org/10.1073/pnas.1919313117

Veno, M. T., Veno, S. T., Rehberg, K., van Asperen, J. V., Clausen, B. H., Holm, I. E., Pasterkamp, R. J., Finsen, B. & Kjems, J. (2017). Cortical Morphogenesis during Embryonic Development Is Regulated by miR-34c and miR-204. Frontiers in Molecular Neuroscience, 10(31), Article 31. https://doi.org/10.3389/fnmol.2017.00031

Venkateshwarlu, S., Nayak, S., Marlton, F. P., Weyland, F., Novak, N., Maurya, D., Veerabhadraiah, Y., Borkiewicz, O., Beyer, K. A., Jorgensen, M. R. V. & Pramanick, A. (2020). Relaxor behavior and electrothermal properties of Sn- and Nb-modified (Ba,Ca)TiO₃ Pb-free ferroelectric. Journal of Materials Research, 35(8), 1017-1027. https://doi.org/10.1557/jmr.2020.25

Venkateshwarlu, S., Venkataraman, L. K., Segouin, V., Marlton, F. P., Hin, H. C., Chernyshov, D., Ren, Y., Jørgensen, M. R. V., Nayak, S., Rödel, J., Daniel, L. & Pramanick, A. (2020). Large electromechanical strain and unconventional domain switching near phase convergence in a Pb-free ferroelectric. Communications Physics, 3, Article 193. https://doi.org/10.1038/s42005-020-00459-2

Venkataramani, K., Helveg, S., Hinnemann, B., Reichling, M., Besenbacher, F. & Lauritsen, J. V. (2010). Ordering of monodisperse Ni nanoclusters by templating on high-temperature reconstructed a-Al2O3(0001). Nanotechnology, 21(26), 265602. https://doi.org/10.1088/0957-4484/21/26/265602

Venkataramani, K. (2010). Non-contact Atomic Force Microscopy Studies of Metal Oxide Surfaces and Oxide Supported Metal Nanoclusters.

Venkataramani, K., Jensen, T. N., Helveg, S., Reichling, M., Besenbacher, F. & Lauritsen, J. V. (2012). Al₂O₃(1120) surface as a template for the ordered growth of Ni and Co nanoclusters. Physical Chemistry Chemical Physics, 14, 2092-2098. https://doi.org/10.1039/c2cp22712f

Vendel Nielsen, L., Hansen, T. P. K., Young, C., Ferreri, C., Chatgilialoglu, C., Jensen, O. N. & Enghild, J. J. (2013). Effects of Elaidic Acid on Lipid Metabolism in HepG2 Cells, Investigated by an Integrated Approach of Lipidomics, Transcriptomics and Proteomics. PLOS ONE, 8(9), Article e74283. https://doi.org/10.1371/journal.pone.0074283

Veillard, F., Sztukowska, M., Mizgalska, D., Ksiazek, M., Houston, J., Potempa, B., Enghild, J. J., Thøgersen, I. B., Gomis-Rüth, F. X., Nguyen, K.-A. & Potempa, J. (2013). Inhibition of gingipains by their profragments as the mechanism protecting Porphyromonas gingivalis against premature activation of secreted proteases. BBA General Subjects, 1830(8), 4218-4228. https://doi.org/10.1016/j.bbagen.2013.04.005

Veillard, F., Sztukowska, M., Nowakowska, Z., Mizgalska, D., Thøgersen, I. B., Enghild, J. J., Bogyo, M., Potempa, B., Nguyen, K.-A. & Potempa, J. (2019). Proteolytic processing and activation of gingipain zymogens secreted by T9SS of Porphyromonas gingivalis. Biochimie, 166, 161-172. https://doi.org/10.1016/j.biochi.2019.06.010

Vázquez-Padín, J., Mosquera-Corral, A., Campos, J. L., Méndez, R. & Revsbech, N. P. (2010). Microbial community distribution and activity dynamics of granular biomass in a CANON reactor. Water Research, 44, 4359-4370. https://doi.org/10.1016/j.watres.2010.05.041

Vázquez-Campos, S., Péter, M., Dong, M., Xu, S., Xu, W., Gersen, H., Linderoth, T. R., Schönherr, H., Besenbacher, F., Crego-Calama, M. & Reinhoudt, D. N. (2007). Self-organization of gold-containing hydrogen-bonded rosette assemblies on graphite surface. Langmuir, 23(20), 10294-8. https://doi.org/10.1021/la701330v

Vase, K. H., Holm, A. H., Pedersen, S. U. & Daasbjerg, K. (2005). Immobilization of Aryl and Alkynyl Groups onto Glassy Carbon Surfaces by Electrochemical Reduction of Iodonium Salts. Langmuir, 21, 8085-8089.

Vase, K. H., Holm, A. H., Pedersen, S. U. & Daasbjerg, K. (2006). Covalent Immobilization of Alkynyl and Aryl Groups onto Glassy Carbon Surfaces by Electrochemical Reduction of Iodonium Salts. Abstract from Electrochemistry in Surface Functionalization, La Palma (Canary Islands), Spain.

Vase, K. H., Holm, A. H., Winther-Jensen, B., Pedersen, S. U. & Daasbjerg, K. (2007). Evaluation of various strategies to formation of pH responsive hydroquinone-terminated films on carbon electrodes. Electrochimica Acta, 53, 1680-1688. https://doi.org/10.1016/j.electacta.2007.08.018

Vase, K. H., Holm, A. H., Norrman, K., Pedersen, S. U. & Daasbjerg, K. (2008). Electrochemical Surface Derivatization of Glassy Carbon by the Reduction of Triaryl- and Alkyldiphenylsulfonium Salts. Langmuir, 24, 182-188.

Vasani, R. B., McInnes, S. J. P., Cole, M. A., Jani, A. M. M., Ellis, A. V. & Voelcker, N. H. (2011). Stimulus-responsiveness and drug release from porous silicon films ATRP-grafted with poly(N-isopropylacrylamide). Langmuir, 27(12), 7843-53. https://doi.org/10.1021/la200551g

van't Hag, L., Li, X., Meikle, T. G., Hoffmann, S. V., Jones, N. C., Pedersen, J. S., Hawley, A. M., Gras, S. L., Conn, C. E. & Drummond, C. J. (2016). How Peptide Molecular Structure and Charge Influence the Nanostructure of Lipid Bicontinuous Cubic Mesophases: Model Synthetic WALP Peptides Provide Insights. Langmuir, 32(27), 6882-6894. https://doi.org/10.1021/acs.langmuir.6b01058

Vangoor, V. R., Giuliani, G., de Wit, M., Rangel, C. K., Venø, M. T., Schulte, J. T., Gomes-Duarte, A., Senthilkumar, K., Puhakka, N., Kjems, J., de Graan, P. N. E. & Pasterkamp, R. J. (2024). Compartment-specific small non-coding RNA changes and nucleolar defects in human mesial temporal lobe epilepsy. Acta Neuropathologica, 148(1), Article 61. https://doi.org/10.1007/s00401-024-02817-8

van Gils, J. H. M., van Dijk, E., Peduzzo, A., Hofmann, A., Vettore, N., Schützmann, M. P., Groth, G., Mouhib, H., Otzen, D. E., Buell, A. K. & Abeln, S. (2020). The hydrophobic effect characterises the thermodynamic signature of amyloid fibril growth. PLOS Computational Biology, 16(5), Article e1007767. https://doi.org/10.1371/journal.pcbi.1007767

Vang, R. T., Honkala, K., Dahl, S., Vestergaard, E. K., Schnadt, J., Lægsgaard, E., Clausen, B. S., Nørskov, J. K. & Besenbacher, F. (2005). Controlling the catalytic bond-breaking selectivity of Ni surfaces by step-blocking. Nature Materials, 4, 60-62.

Vang, R. T., Wang, J. G., Knudsen, J., Schnadt, J., Lægsgaard, E., Stensgaard, I. & Besenbacher, F. (2005). The adsorption structure of NO on Pd (111) at high pressures studied by STM and DFT. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 109(30), 14262-14265.

Vang, R. T., Honkala, K., Dahl, S., Vestergaard, E. K., Schnadt, J., Lægsgaard, E., Clausen, B. S., Nørskov, J. K. & Besenbacher, F. (2006). Ethylene dissociation on flat and stepped Ni(1 1 1): A combined STM and DFT study. Surface Science, (600), 66-77.

Vang, R. T., Lægsgaard, E. & Besenbacher, F. (2007). Bridging the pressure gap in model systems for heterogeneous catalysis with high-pressure scanning tunneling microscopy. Physical Chemistry Chemical Physics.

Vang, R. T., Lauritsen, J. V., Lægsgaard, E. & Besenbacher, F. (2008). Scanning tunneling microscopy as a tool to study catalytically relevant model systems. Chemical Society Reviews, 37, 2191-2203. https://doi.org/10.1039/b800307f

van Erk, M. R., Krukenberg, V., Bomholt Jensen, P., Littmann, S. & de Beer, D. (2021). Conspicuous Smooth and White Egg-Shaped Sulfur Structures on a Deep-Sea Hydrothermal Vent Formed by Sulfide-Oxidizing Bacteria. Microbiology Spectrum, 9(2), Article e00955-21. https://doi.org/10.1128/Spectrum.00955-21

van Diggelen, F. (2017). Targeting α-synuclein oligomers: The importance of characterisation. Aarhus University.

van Diggelen, F., Tepper, A., Petri, M. & Otzen, D. (2017). α-Synuclein Oligomers: A Study in Diversity. Israel Journal of Chemistry, 57(7-8), 699-723. https://doi.org/10.1002/ijch.201600116

van Diggelen, F., Hrle, D., Apetri, M., Christiansen, G., Rammes, G., Tepper, A. & Otzen, D. E. (2019). Two conformationally distinct α-synuclein oligomers share common epitopes and the ability to impair long-term potentiation. PLOS ONE, 14(3), Article 0213663. https://doi.org/10.1371/journal.pone.0213663

van Diggelen, F., Frank, S. A., Somavarapu, A. K., Scavenius, C., Apetri, M. M., Nielsen, J., Tepper, A. W. J. W., Enghild, J. J. & Otzen, D. E. (2020). The interactome of stabilized α-synuclein oligomers and neuronal proteins. FEBS journal, 287(10), 2037-2054. https://doi.org/10.1111/febs.15124

van der Westen, R., Rigau, L. H., Sutherland, D. S., Goldie, K., Alebericio, F., Postma, A. & Stadler, B. (2012). Myoblast Cell Interaction with Polydopamine Coated Liposomes. Biointerphases, 7, 8. https://doi.org/10.1007/s13758-011-0008-4

Vandecaetsbeek, I., Christensen, S. B., Liu, H., Van Veldhoven, PP., Waelkens, E., Eggermont, J., Raeymaekers, L., Møller, J. V., Nissen, P., Wuytack, F. & Vangheluwe, P. (2011). Thapsigargin affinity purification of intracellular P(2A)-type Ca(2+) ATPases. BBA General Subjects, 1813(5), 1118-27.

Valnickova, Z., Thøgersen, I., Skottrup, P., Christensen, T., Højrup, P. & Enghild, J. J. (2006). Post-translational modifications of human thrombin-activatable fibrinolysis inhibitor (TAFI): evidence for a large shift in the isoelectric point and reduced solubility upon activation. Biochemistry, 5(45), 1525-35.

Valnickova, Z., Petersen, S. V., Nielsen, SB., Otzen, D. & Enghild, J. J. (2007). Heparin binding induces a conformational change of pigment epithelium-derived factor (PEDF). Journal of Biological Chemistry.

Valnickova, Z., Thøgersen, I., Christensen, S., Chu, C. T., Pizzo, S. V. & Enghild, J. J. (1996). Activated human plasma carboxypeptidase B is retained in the blood by binding to alpha2-macroglobulin and pregnancy zone protein. Journal of Biological Chemistry, 271(22), 12937-43.

Valnickova, Z. & Enghild, J. J. (1998). Human procarboxypeptidase U, or thrombin-activable fibrinolysis inhibitor, is a substrate for transglutaminases. Evidence for transglutaminase-catalyzed cross-linking to fibrin. Journal of Biological Chemistry, 273(42), 27220-4.

Valnickova, Z., Thaysen-Andersen, M., Højrup, P., Christensen, T., Sanggaard, K. W., Kristensen, T. & Enghild, J. J. (2009). Biochemical characterization of bovine plasma thrombin-activatable fibrinolysis inhibitor (TAFI). B M C Biochemistry, 10, 13. https://doi.org/10.1186/1471-2091-10-13

Valnickova, Z., Sanglas, L., Arolas, J. L., Petersen, S. V., Schar, C., Otzen, D., Aviles, F. X., Gomis-Ruth, F. X. & Enghild, J. J. (2010). Flexibility of the thrombin-activatable fibrinolysis inhibitor pro-domain enables productive binding of protein substrates. Journal of Biological Chemistry. https://doi.org/10.1074/jbc.M110.150342

Vallina, N. S., Geary, C., Jepsen, M. & Andersen, E. S. (2023). Computer-Aided Design and Production of RNA Origami as Protein Scaffolds and Biosensors. In J. Valero (Ed.), DNA and RNA Origami: Methods and protocols (pp. 51-67). Humana Press. https://doi.org/10.1007/978-1-0716-3028-0_3

Vallina, N. S., McRae, E. K. S., Geary, C. & Andersen, E. S. (2024). An RNA origami robot that traps and releases a fluorescent aptamer. Science Advances, 10(12), Article eadk1250. https://doi.org/10.1126/sciadv.adk1250