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Interdisciplinary Nanoscience Center

Publications

We publish in a broad array of journals… To view list of publications related to nanoscience/technology by scientists associated with iNANO

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Šuláková, M., Pazlarová, J., Meyer, R. L. & Demnerová, K. (2019). Distribution of extracellular DNA in Listeria monocytogenes biofilm. Czech Journal of Food Sciences, 37(6), 409-416. https://doi.org/10.17221/9/2019-CJFS

Sükösd, Z., Knudsen, B., Værum, M., Kjems, J. & Andersen, E. S. (2011). Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars. B M C Bioinformatics, 12(103). https://doi.org/10.1186/1471-2105-12-103

Sükösd, Z., Knudsen, B., Kjems, J. & Pedersen, C. N. S. (2012). PPfold 3.0: fast RNA secondary structure prediction using phylogeny and auxiliary data. Bioinformatics, 28(20), 2691-2692. https://doi.org/10.1093/bioinformatics/bts488

Sükösd, Z., Swenson, M. S., Kjems, J. & Heitsch, C. E. (2013). Evaluating the accuracy of SHAPE-directed RNA secondary structure predictions. Nucleic Acids Research, 41(5), 2807-2816. https://doi.org/10.1093/nar/gks1283

Sükösd, Z., Knudsen, B., Anderson, J. WJ., Novák, A., Kjems, J. & Pedersen, C. N. S. (2013). Characterising RNA secondary structure space using information entropy. B M C Bioinformatics, 14 (Suppl 2), 1-9. Article S22. https://doi.org/10.1186/1471-2105-14-S2-S22

Sükösd, Z. (2013). Viral RNA secondary structure prediction.

Sükösd, Z., Andersen, E. S. & Lyngsø, R. (2014). SCFGs in RNA secondary structure prediction: a hands-on approach. Methods in Molecular Biology, 1097, 143-62. https://doi.org/10.1007/978-1-62703-709-9__8, https://doi.org/10.1007/978-1-62703-709-9_8

Sukosd, Z., Andersen, E. S., Seemann, S. E., Jensen, M., Hansen, M. B., Gorodkin, J. & Kjems, J. (2015). Full-length RNA structure prediction of the HIV-1 genome reveals a conserved core domain. Nucleic Acids Research, 43(21), 10168-10179. https://doi.org/10.1093/nar/gkv1039

Sugimoto, Y., Watanabe, Y., Ikeda, N., Ozaki, N., Mizutani, M., Takata, Y., Asakawa, K., Ishikawa, H., Jensen, J. S., Sigmund, O., Borel, P. I. & Kristensen, M. (2006). Topology optimization for photonic crystal waveguide intersection with wide and flat bandwidths in ultra-fast all-optical switch (PC-SMZ). Paper presented at ECOC'06, Cannes, France.

Suetta, C., Merhi, Y., Mikkelsen, P. H. & Nygaard, J. V. (2023). Dry electrode integrated with garment. (Patent No. WO2023209148 (A1)). https://dk.espacenet.com/publicationDetails/biblio?DB=EPODOC&II=0&ND=3&adjacent=true&locale=dk_DK&FT=D&date=20231102&CC=WO&NR=2023209148A1&KC=A1#

Südkamp, T., Bracht, H., Impellizzeri, G., Hansen, J. L., Nylandsted Larsen, A. & Haller, E. E. (2013). Doping dependence of self-diffusion in germanium and the charge states of vacancies. Applied Physics Letters, 102(24), Article 242103 . https://doi.org/10.1063/1.4811442

Subrizi, A., Yang, C., Ilmarinen, T., Skottman, H., Urtti, A. & Kjems, J. (2018). Lipidoid-siRNA formulations promote gene silencing in differentiated and nondividing ARPE-19, primary porcine and human embryonic stem cell-derived retinal pigment epithelial cells. Abstract from Annual Meeting of the Association-for-Research-in-Vision-and-Ophthalmology (ARVO), Honolulu. https://iovs.arvojournals.org/article.aspx?articleid=2693003&resultClick=1

Subrizi, A., del Amo, E. M., Korzhikov-Vlakh, V., Tennikova, T., Ruponen, M. & Urtti, A. (2019). Design principles of ocular drug delivery systems: importance of drug payload, release rate, and material properties. Drug Discovery Today, 24(8), 1446-1457. https://doi.org/10.1016/j.drudis.2019.02.001

Subramani, R., Jensen, S. J., Rotaru, A., Andersen, F. F., Gothelf, K. V., Mamdouh, W., Besenbacher, F., Dong, M. & Knudsen, B. R. (2010). A Novel Secondary DNA Binding Site in Human Topoisomerase I Unravelled by using a 2D DNA Origami Platform. A C S Nano, 4, 5969-77.

Subramani, R. (2011). Self-assembly of DNA Nanostructures Studied by Scanning Probe Microscopy.

Subia, B., Reinisalo, M., Dey, N., Tavakoli, S., Subrizi, A., Ganguli, M. & Ruponen, M. (2019). Nucleic acid delivery to differentiated retinal pigment epithelial cells using cell-penetrating peptide as a carrier. European Journal of Pharmaceutics and Biopharmaceutics, 140, 91-99. https://doi.org/10.1016/j.ejpb.2019.05.003

Subbiahdoss, G., Zeng, G., Aslan, H., Ege Friis, J., Iruthayaraj, J., Zelikin, A. N. & Meyer, R. L. (2019). Antifouling properties of layer by layer DNA coatings. Biofouling, 35(1), 75-88. https://doi.org/10.1080/08927014.2019.1568417

Suárez, A. (2017). Development of new linker strategies for the yoctoReactor technology. Aarhus University.

Su, R., Bechstein, R., Sø, L., Vang, R. T., Sillassen, M. B., Esbjørnsson, B., Palmqvist, A. & Besenbacher, F. (2011). How the Anatase-to-Rutile Ratio Influences the Photoreactivity of TiO(2). Journal of Physical Chemistry Part C: Nanomaterials and Interfaces, 115(49). https://doi.org/10.1021/jp2086768

Su, R., Tiruvalam, R., He, Q., Dimitratos, N., Kesavan, L., Hammond, C., Antonio Lopez-Sanchez, J., Bechstein, R., Kiely, C., Hutchings, G. & Besenbacher, F. (2012). Promotion of Phenol Photodecomposition over TiO2 Using Au, Pd, and AuPd Nanoparticles. A C S Nano, 6(7), 6284-6292. https://doi.org/10.1021/nn301718v

Su, R., Bechstein, R., Kibsgaard, J., Vang, R. T. & Besenbacher, F. (2012). High-Quality Fe-doped TiO2 films with Superior Visible-Light Performance. Journal of Materials Chemistry, 22(45), 23755-23758. https://doi.org/10.1039/C2JM34298G

Su, R. (2012). TiO2 Based Photocatalyst: From Synthesis and Characterization to Optimization and Design.

Su, R., Lu, Z., Jiang, S., Shen, Y., Su, W. & Chen, K. (2013). Ag decorated (Ba,Sr)(Co,Fe)O₃ cathodes for solid oxide fuel cells prepared by electroless silver deposition. International Journal of Hydrogen Energy, 38(5), 2413-2420. https://doi.org/10.1016/j.ijhydene.2012.11.126

Su, R., Christensen, M., Shen, Y., Kibsgaard, J., Elgh, B., Vang, R. T., Bechstein, R., Wendt, S., Palmqvist, A., Iversen, B. B. & Besenbacher, F. (2013). Rapid Synthesis of Porous, Mixed Phase Titania Films with Tailored Orientation of Rutile for Enhanced Photocatalytic Performance. The Journal of Physical Chemistry Part C, 117(51), 27039-27046. https://doi.org/10.1021/jp4106713

Su, R., Tiruvalam, R., Logsdail, A., He, Q., Downing, C., Jensen, M. T., Dimitratos, N., Kesavan, L., Wells, P., Bechstein, R., Jensen, H. H., Wendt, S., Catlow, C. R., Kiely, C., Hutchings, G. & Besenbacher, F. (2014). Designer Titania-Supported Au–Pd Nanoparticles for Efficient Photocatalytic Hydrogen Production. ACS Nano, 8(4), 3490-3497. https://doi.org/10.1021/nn500963m

Su, R., Forde, M., He, Q., Shen, Y., Wang, X., Dimitratos, N., Wendt, S., Huang, Y., Iversen, B. B., Kiely, C., Besenbacher, F. & Hutchings, G. (2014). Well-controlled metal co-catalysts synthesised by chemical vapour impregnation for photocatalytic hydrogen production and water purification. Journal of the Chemical Society. Dalton Transactions, 43(40), 14976-14982. https://doi.org/10.1039/C4DT01309C

Su, R., Kesavan, L., Jensen, M. M., Tiruvalam, R., He, Q., Dimitratos, N., Wendt, S., Glasius, M., Kiely, C., Hutchings, G. & Besenbacher, F. (2014). Selective Photocatalytic Oxidation of Benzene for the Synthesis of Phenol Using Engineered Au-Pd Alloy Nanoparticles Supported on Titanium Dioxide. Chemical Communications, 84, 12612-12614. https://doi.org/10.1039/C4CC04024D

Su, R., Dimitratos, N., Liu, J., Carter, E., Althahban, S., Wang, X., Shen, Y., Wendt, S., Wen, X., Niemantsverdriet, J. W., Iversen, B. B., Kiely, C., Hutchings, G. J. & Besenbacher, F. (2016). Mechanistic Insight into the Interaction Between a Titanium Dioxide Photocatalyst and Pd Cocatalyst for Improved Photocatalytic Performance. ACS Catalysis, 6(7), 4239-4247. https://doi.org/10.1021/acscatal.6b00982

Su, R., Besenbacher, F. & Hutchings, G. (2016). Alternative materials to TiO2. In J. C. Colmenares & Y. Xu (Eds.), Heterogeneous photocatalysis: From Fundamentals to Green Applications (pp. 109-149). Springer. https://doi.org/10.1007/978-3-662-48719-8_4

Su, Y., Ma, S., Zhao, X., Dong, M. & Han, X. (2017). Template-free synthesis of inorganic hollow spheres at water/"water-brother" interfaces as Fenton-like reagents for water treatment. Journal of Environmental Sciences, 55, 331-338. https://doi.org/10.1016/j.jes.2016.10.012

Su, Y., Zhang, Z., Wang, Z., Chen, M., Dong, MD. & Han, X. (2017). Necklace-like Fiber Composite Membrane for High-efficiency Particulate Matter Capture. Applied Surface Science, 425, 220-226. https://doi.org/10.1016/j.apsusc.2017.07.036, https://doi.org/10.1016/j.apsusc.2017.07.036

Su, C., Tripathi, M., Yan, Q. B., Wang, Z., Zhang, Z., Hofer, C., Wang, H., Basile, L., Su, G., Dong, M., Meyer, J. C., Kotakoski, J., Kong, J., Idrobo, J. C., Susi, T. & Li, J. (2019). Engineering single-atom dynamics with electron irradiation. Science Advances, 5(5), Article eaav2252. https://doi.org/10.1126/sciadv.aav2252

Su, C., Yin, Z., Yan, Q. B., Wang, Z., Lin, H., Sun, L., Xu, W., Yamada, T., Ji, X., Zettsu, N., Teshima, K., Warner, J. H., Dincă, M., Hu, J., Dong, M., Su, G., Kong, J. & Li, J. (2019). Waterproof molecular monolayers stabilize 2D materials. Proceedings of the National Academy of Sciences (PNAS), 116(42), 20844-20849. https://doi.org/10.1073/pnas.1909500116

Su, Y., Taskin, M. B., Dong, MD., Han, X., Besenbacher, F. & Chen, M. (2020). A biocompatible artificial tendril with a spontaneous 3D Janus multi-helix-perversion configuration. Materials Chemistry Frontiers, 4(7), 2149-2156. https://doi.org/10.1039/D0QM00125B

Su, Y., Zhang, Z., Wan, Y., Zhang, Y., Wang, Z., Klausen, L. H., Huang, P., Dong, MD., Han, X., Cui, B. & Chen, M. (2020). A hierarchically ordered compacted coil scaffold for tissue regeneration. NPG Asia Materials, 12(1), Article 55. https://doi.org/10.1038/s41427-020-0234-7

Su, Y., Zhang, E., Wang, Y., Li, Q., Chen, M. & Dong, MD. (2020). Tunable Hierarchical Wrinkling Surface via Microscale Patterned Vertical Deformation. Colloids and Surfaces A: Physicochemical and Engineering Aspects, 607, Article 125468. https://doi.org/10.1016/j.colsurfa.2020.125468

Su, Y., Qiu, T., Song, W., Han, X., Sun, M., Wang, Z., Xie, H., Dong, MD. & Chen, M. (2021). Melt Electrospinning Writing of Magnetic Microrobots. Advanced Science, 8(3), Article 2003177. https://doi.org/10.1002/advs.202003177

Su, Y., Toftdal, M. S., Friec, A. L., Dong, MD., Han, X. & Chen, M. (2021). 3D Electrospun Synthetic Extracellular Matrix for Tissue Regeneration. Small Science, 1(7), Article 2100003. https://doi.org/10.1002/smsc.202100003

Su, Y., Li, Q., Amagat, J. & Chen, M. (2021). 3D spring-based piezoelectric energy generator. Nano Energy, 90, Article 106578. https://doi.org/10.1016/j.nanoen.2021.106578

Su, Y., Müller, C. A., Xiong, X., Dong, M. & Chen, M. (2022). Reshapable Osteogenic Biomaterials Combining Flexible Melt Electrowritten Organic Fibers with Inorganic Bioceramics. Nano Letters, 22(9), 3583–3590. https://doi.org/10.1021/acs.nanolett.1c04995

Su, Z., Zhang, X., Wang, W., Dong, M. & Han, X. (2023). Light-Harvesting Artificial Cells for the Generation of ATP and NADPH^†. Chinese Journal of Chemistry, 41(1), 57-63. https://doi.org/10.1002/cjoc.202200482

Su, Y., Zhang, Y., Chen, Y., Majidi, S. S., Dong, M. & Chen, M. (2024). Surface recrystallization on melt electrowritten scaffolds for acceleration of osteogenic differentiation. Materials Today Physics, 41, Article 101344. https://doi.org/10.1016/j.mtphys.2024.101344

Su, Z., Boucetta, H., Shao, J., Huang, J., Wang, R., Shen, A., He, W., Xu, Z. P. & Zhang, L. (2024). Next-generation aluminum adjuvants: Immunomodulatory layered double hydroxide NanoAlum reengineered from first-line drugs. Acta Pharmaceutica Sinica B, 14(11), 4665-4682. https://doi.org/10.1016/j.apsb.2024.09.012

Stumm, C., Bertram, M., Kastenmeier, M., Speck, F. D., Sun, Z., Rodríguez-Fernández, J., Lauritsen, J. V., Mayrhofer, K. J. J., Cherevko, S., Brummel, O. & Libuda, J. (2021). Structural Dynamics of Ultrathin Cobalt Oxide Nanoislands under Potential Control. Advanced Functional Materials, 31(13), Article 2009923. https://doi.org/10.1002/adfm.202009923

Stubenrauch, C., Claesson, P. M., Rutland, M., Manev, E., Johansson, I., Pedersen, J. S., Langevin, D., Blunk, D. & Bain, C. D. (2010). Mixtures of n-dodecyl-beta-D-maltoside and hexaoxyethylene dodecyl ether--surface properties, bulk properties, foam films, and foams. Advances in Colloid and Interface Science, 155(1-2), 5-18. https://doi.org/10.1016/j.cis.2009.12.002

Strittmatter, W. J., Saunders, A. M., Schmechel, D., Pericak-Vance, M., Enghild, J., Salvesen, G. S. & Roses, A. D. (1993). Apolipoprotein E: high-avidity binding to beta-amyloid and increased frequency of type 4 allele in late-onset familial Alzheimer disease. Proceedings of the National Academy of Sciences (PNAS), 90(5), 1977-81.

Straasø, L. A., Bjerring, M., Khaneja, N. & Nielsen, N. C. (2009). Multiple-oscillating-field techniques for accurate distance measurements by solid-state NMR. Journal of Chemical Physics, 130, 225103-1-225103-14. https://doi.org/10.1063/1.3147010

Straasø, L. A., Bjerring, M., Khaneja, N. & Nielsen, N. C. (2009). Four-Oscillating-Fiels Technique for Accurate Distance Measurement by Solid-State NMR. Poster session presented at 50th Experimental NMR Conference (ENC), Asilomar, CA, United States.

Straasø, L. A. & Nielsen, N. C. (2010). Recoupling of native homonuclear dipolar couplings in magic-angle-spinning solid-state NMR by the double-oscillating field technique. Journal of Chemical Physics, 133, 064501.

Straasø, L. A. (2012). Novel Recoupling Solid-State NMR Experiments for Accurate Distance Measurements in Proteins.

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Lise Refstrup Linnebjerg Pedersen