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Interdisciplinary Nanoscience Center

Publications

We publish in a broad array of journals… To view list of publications related to nanoscience/technology by scientists associated with iNANO

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Aliakbari, F., Mohammad-Beigi, H., Rezaei-Ghaleh, N., Becker, S., Dehghani Esmatabad, F., Eslampanah Seyedi, H. A., Bardania, H., Tayaranian Marvian, A., Collingwood, J. F., Christiansen, G., Zweckstetter, M., Otzen, D. E. & Morshedi, D. (2018). The potential of zwitterionic nanoliposomes against neurotoxic alpha-synuclein aggregates in Parkinson's Disease. Nanoscale, 10(19), 9174-9185. https://doi.org/10.1039/c8nr00632f

Williams, C., Lauridsen, H., Hansen, K., Birkedal, H., Herskin, M. S. & Riber, A. B. (2024). The potential of using keel bone fracture in laying hens to investigate bone pain in a high mineral turnover, late mineralizing bone – a research plan.. Poster session presented at 7th Danish Bone Research Workshop, Denmark.

Thomsen, T. B. (2014). The potential of chitosan-based siRNA nanocarriers for the oral treatment of Inflammatory Bowel Disease.

Bortolini, C., Liu, L., Gronewold, T. M. A., Wang, C., Besenbacher, F. & Dong, MD. (2014). The position of hydrophobic residues tunes peptide self-assembly. Soft Matter, 10(31), 5656-5661. https://doi.org/10.1039/c4sm01065e

Sneskov, K. (2012). The polarizable embedding coupled cluster method: exciting news from beyond the vacuum.

Sneskov, K., Schwabe, T., Kongsted, J. & Christiansen, O. (2011). The polarizable embedding coupled cluster method. Journal of Chemical Physics, 134, 104108-104123. https://doi.org/10.1063/1.3560034

Lv, Y. A., Cui, Y. H., Li, X. N., Song, X. Z., Wang, J. G. & Dong, M. D. (2010). The point-defect of carbon nanotubes anchoring Au nanoparticles. Physica E-Low-Dimensional Systems & Nanostructures, 42(5).

Arnou, B. J.-P., Montigny, C., Morth, J. P., Nissen, P., Jaxel, C., Møller, J. V. & le Maire, M. (2011). The Plasmodium falsiparum Ca(2+)-ATPase PfATP6: insensitive to artemisin, but a potential drug target. Biochemical Society. Transactions, 39(3), 823-831.

Andreasen, P., Egelund, R. & Petersen, H. H. (2000). The plasminogen activation system in tumor growth, invasion and metastasis. Cell. Mol. Life Sci., 57, 25-40.

Heegaard, C. W., Larsen, L. B., Rasmussen, L. K., Højberg, K.-E., Petersen, T. E. & Andreasen, P. (1997). The plasminogen activation system in human milk. Journal of Pediatric Gastroenterology and Nutrition, 25, 159-166.

Heegaard, C. W., K. Rasmussen, L. & Andreasen, P. (1994). The plasminogen activation system in bovine milk: differential localization of tissue‑type plasminogen activator and urokinase in milk fractions is caused by binding to casein and urokinase receptor. B B A - Molecular Cell Research, 1222, 45-55.

Denofrio, M. P., Hatz, S., Lorente, C., Cabrerizo, F. M., Ogilby, P. R. & Thomas, A. H. (2009). The photosensitizing activity of lumazine using 2'-deoxyguanosine 5'-monophosphate and HeLa cells as targets. Photochemical & Photobiological Sciences, 8, 1539-1549.

Tjelldén, A. K. E., Kristiansen, S. M., Birkedal, H. & Jans, M. M. E. (2018). The pattern of human bone dissolution-A histological study of Iron Age warriors from a Danish wetland site. International Journal of Osteoarchaeology, 28(4), 407-418. https://doi.org/10.1002/oa.2666

Brouwer, M., Brouwer, T. H., Grater, W., Enghild, J. J. & Thøgersen, I. (1997). The paradigm that all oxygen-respiring eukaryotes have cytosolic CuZn-superoxide dismutase and that Mn-superoxide dismutase is localized to the mitochondria does not apply to a large group of marine arthropods. Biochemistry, 36(43), 13381-8. https://doi.org/10.1021/bi971052c

Basyuk, E., Boulon, S., Pedersen, F. S., Bertrand, E. & Rasmussen, S. V. (2005). The Packaging Signal of MLV is an Integrated Module that Mediates Intracellular Transport of Genomic RNAs. J. Mol. Biol., 352, 330-339.

de Diego, I., Ksiazek, M., Mizgalska, D., Koneru, L., Golik, P., Szmigielski, B., Nowak, M., Nowakowska, Z., Potempa, B., Houston, J. A., Enghild, J. J., Thøgersen, I. B., Gao, J., Kwan, A. H., Trewhella, J., Dubin, G., Gomis-Rüth, F. X., Nguyen, K.-A. & Potempa, J. (2016). The outer-membrane export signal of Porphyromonas gingivalis type IX secretion system (T9SS) is a conserved C-terminal β-sandwich domain. Scientific Reports, 6, 23123. Article 23123. https://doi.org/10.1038/srep23123

Palle, J., Wittig, N. K., Østergaard, M., Jensen, A. B. & Birkedal, H. (2019). The osteocyte lacuno-canalicular network in bone investigated by synchrotron radiation-based techniques. In B. Müller & G. Wang (Eds.), Developments in X-Ray Tomography XII (Vol. 11113). Article 1111316 SPIE. Digital Library. https://doi.org/10.1117/12.2531980

Coutinho, J., Torres, V. J. B., Marques Pereira, R. N., Nielsen, B. B., Jones, R. & Briddon, P. R. (2006). Theory of anharmonicity on bond-centered hydrogen oscillators in silicon. Physica B, 376-377, 126.

Nielsen, C. L., Andricevic, P., Julsgaard, B., Jain, M., Balling, P. & Martinez Turtos, R. (2023). The origin of room-temperature self-trapped-exciton luminescence in LiF nanoparticles. Physical Review Materials, 7(10), Article 106001. https://doi.org/10.1103/PhysRevMaterials.7.106001

Wang, J. & Hammer, B. (2006). Theoretical study of H_2 O dissociation and CO oxidation on Pt_2 Mo (111). Journal of Catalysis, 243, 192-198.

Nielsen, A. B., Tan, K. O., Shankar, R., Penzel, S., Cadalbert, R., Samoson, A., Meier, B. H. & Ernst, M. (2016). Theoretical description of RESPIRATION-CP. Chemical Physics Letters, 645, 150-156. https://doi.org/10.1016/j.cplett.2015.12.043

Omiste, J. J., Gärttner, M., Schmelcher, P., González-Férez, R., Holmegaard, L., Nielsen, J. H., Stapelfeldt, H. & Küpper, J. (2011). Theoretical description of adiabatic laser alignment and mixed-field orientation: the need for a non-adiabatic model. Physical Chemistry Chemical Physics, 13, 18815-18824. https://doi.org/10.1039/C1CP21195A

Mentink-Vigier, F., Akbey, Ü., Oschkinat, H., Vega, S. & Feintuch, A. (2015). Theoretical aspects of Magic Angle Spinning - Dynamic Nuclear Polarization. Journal of Magnetic Resonance, 258, 102-120. https://doi.org/10.1016/j.jmr.2015.07.001

Zhang, T., Xue, Q., Zhang, S. & Dong, M. (2012). Theoretical approaches to graphene and graphene-based materials. Nano Today, 7(3), 180-200. https://doi.org/10.1016/j.nantod.2012.04.006

Zavorotynska, O., Corno, M., Pinatel, E., Rude, L. H., Ugliengo, P., Jensen, T. R. & Baricco, M. (2012). Theoretical and Experimental Study of LiBH4-LiCl Solid Solution. Crystals, 2, 144-158.

Dyla, M., González Foutel, N. S., Otzen, D. E. & Kjaergaard, M. (2022). The optimal docking strength for reversibly tethered kinases. Proceedings of the National Academy of Sciences (PNAS), 119(25), Article e2203098119. https://doi.org/10.1073/pnas.2203098119

Pakpour-Tabrizi, A. C., Schenk, A. K., Holt, A. J. U., Mahatha, S. K., Arnold, F., Bianchi, M., Jackman, R. B., Butler, J. E., Vikharev, A., Miwa, J. A., Hofmann, P., Cooil, S. P., Wells, J. W. & Mazzola, F. (2020). The occupied electronic structure of ultrathin boron doped diamond. Nanoscale Advances, 2(3), 1358-1364. https://doi.org/10.1039/c9na00593e

Lorenzen, N., Lemminger, L., Pedersen, J. N., Nielsen, S. B. & Otzen, D. (2014). The N-terminus of α-synuclein is essential for both monomeric and oligomeric interactions with membranes. FEBS Letters, 588(3), 497-502. https://doi.org/10.1016/j.febslet.2013.12.015

Dabrowski, M., Ashcroft, F. M., Ashfield, R., Lebrun, P., Pirotte, B., Jensen, J. E., J.B., H. & Wahl, P. (2002). The novel diazoxide analog 3-isopropylamino-7methoxy-4H-1,2,4-benzothiadiazine 1,1-dioxide is a selective Kir6.2/SUR1 channel opener. Diabetes, 51, 1896-1906.

Iversen, N. K., Malte, H., Baatrup, E. & Nielsen, T. W. (2012). The normal acid-base status of mice. Respiratory Physiology & Neurobiology, 180, 252-257.

Marzookian, K., Aliakbari, F., Hourfar, H., Sabouni, F., Otzen, D. E. & Morshedi, D. (2025). The neuroprotective effect of human umbilical cord MSCs-derived secretome against α-synuclein aggregates on the blood-brain barrier. International Journal of Biological Macromolecules, 304(Part 1), Article 140387. https://doi.org/10.1016/j.ijbiomac.2025.140387

Helwig, M., Hoshino, A., Berridge, C., Lee, S.-N., Lorenzen, N., Otzen, D., Eriksen, J. & Lindberg, I. (2013). The neuroendocrine protein 7B2 suppresses the aggregation of neurodegenerative disease-related proteins. Journal of Biological Chemistry, 288(2), 1114.

Jarvela, T. S., Lam, H. A., Helwig, M., Lorenzen, N., Otzen, D. E., McLean, P. J., Maidment, N. T. & Lindberg, I. (2016). The neural chaperone proSAAS blocks α-synuclein fibrillation and neurotoxicity. Proceedings of the National Academy of Sciences (PNAS), 113(32), E4708-E4715. https://doi.org/10.1073/pnas.1601091113

Frahm, H., Hansen, S. K., Vad, B. S., Nielsen, E. H., Nielsen, J. T., Vosegaard, T., Skrydstrup, T. & Otzen, D. E. (2015). The natural, peptaibolic peptide SPF-5506-A4 adopts a β-bend spiral structure, shows low hemolytic activity and targets membranes through formation of large pores. B B A - Proteins and Proteomics, 1854(8), 882-889. https://doi.org/10.1016/j.bbapap.2015.03.003

Gautrot, J., Malmström, J., Sundh, M., Marqadant, C., Sonnenberg, A. & Sutherland, D. S. (2014). The Nanoscale Geometrical Maturation of Focal Adhesions Controls Stem Cell Differentiation and Mechanotransduction. Nano Letters, 14(7), 3945-3952. https://doi.org/10.1021/nl501248y

Fruergaard, S., Lund, M. B., Schramm, A., Vosegaard, T. & Bilde, T. (2021). The myth of antibiotic spider silk. iScience, 24(10), Article 103125. https://doi.org/10.1016/j.isci.2021.103125

Pedersen, F. S., Paludan, K., Dai, H. Y., Duch, M., Jørgensen, P., Kjeldgaard, N. O., Hallberg, B., Grundström, T., Schmidt, J. & Luz, A. (1991). The murine leukemia virus LTR in oncogenesis: effect of point mutations and chromosomal integration sites. Radiation and Environmental Biophysics, 30(3), 195-7.

Zeng, Y., Masini, F., Rasmussen, A. M. H., Groves, M. N., Albert, V., Boukouvalas, J. & McBreen, P. H. (2018). The most stable adsorption geometries of two chiral modifiers on Pt(111). Surface Science, 676, 17-22. https://doi.org/10.1016/j.susc.2018.02.008

Gliemann, J., Hermey, G., Nykjær, A., Petersen, C. M., Jacobsen, C. & Andreasen, P. (2004). The mosaic receptor sorLA/LR11 binds components of the plasminogen activating system and PDGF-BB similarity to low density lipoprotein receptor-related protein (LRP1) but mediates slow internalization of bound. Biochem. J., 381, 203-212.

Pittkowski, R., Clausen, C. M., Chen, Q., Stoian, D., van Beek, W., Bucher, J., Welten, R. L., Schlegel, N., Mathiesen, J. K., Nielsen, T. M., Du, J., Rosenkranz, A. W., Bøjesen, E. D., Rossmeisl, J., Jensen, K. M. Ø. & Arenz, M. (2023). The more the better: on the formation of single-phase high entropy alloy nanoparticles as catalysts for the oxygen reduction reaction. EES Catalysis, 1(6), 950-960. https://doi.org/10.1039/D3EY00201B

Röcker, A. E., Müller, J. A., Dietzel, E., Harms, M., Krüger, F., Heid, C., Sowislok, A., Riber, C. F., Kupke, A., Lippold, S., von Einem, J., Beer, J., Knöll, B., Becker, S., Schmidt-Charnasit, J., Otto, M., Vapalahti, O., Zelikin, A. N., Bitan, G. ... Münch, J. (2018). The molecular tweezer CLR01 inhibits Ebola and Zika virus infection. Antiviral Research, 152, 26-35. https://doi.org/10.1016/j.antiviral.2018.02.003

Stenvang, M. R., Andreasen, M. & Otzen, D. (2014). The Molecular Basis for TGFBIp-Related Corneal Dystrophies. In Bio-nanoimaging : Protein Misfolding and Aggregation (pp. 179-188). Elsevier. https://doi.org/10.1016/B978-0-12-394431-3.00016-X

Sharifi, S., Jensen, G. V., Pedersen, J. S., Marti, O. & Amirkhani, M. (2014). The mixture of poly(propylene-glycol)-block-poly(ethylene-glycol)-block-PPG with C₁₂E₅ microemulsion. Physics and Chemistry of Liquids, 52(1), 113-121. https://doi.org/10.1080/00319104.2013.806215

Wang, G., Dorn, K. V., Siebeneichler, S., Valldor, M., Smetana, V. & Mudring, A. V. (2022). The missing link between zeolites and polyoxometalates. Science Advances, 8(46), Article eadd9320. https://doi.org/10.1126/sciadv.add9320, https://doi.org/10.1126/sciadv.add9320

Villadsen, S. B., Bramsen, J. B., Ostenfeld, M. S., Wiklund, E. D., Fristrup, N., Gao, S., Hansen, T. B., Jensen, T. I., Borre, M., Orntoft, T. F., Dyrskjøt, L. & Kjems, J. (2012). The miR-143/-145 cluster regulates plasminogen activator inhibitor-1 in bladder cancer. B J C, 106(2), 366-374. https://doi.org/10.1038/bjc.2011.520

Birkedal, H., Froelich, S., Leemreize, H., Stallbohm, R. & Tseng, Y.-H. (2013). The Mineralized Byssus of Anomia Simplex: a Calcified Attachment System. In H. Birkedal, S. Frølic, H. Leemreiz, R. Stallbohm & Y. H. Tseng (Eds.), Biological and Biomimetic Adhesives: Challenges and Opportunities (pp. 16-26). Royal Society of Chemistry. https://doi.org/10.1039/9781849737135-00016

Pedersen, L. R. L. (2011). The milk protein PP3 - structural and functional studies. SUN-TRYK.

Sarup, P. M., Pedersen, S. M., Nielsen, N. C., Malmendal, A. & Loeschcke, V. (2012). The metabolic profile of long-lived Drosophila melanogaster. P L o S One, 7(10), e47461. https://doi.org/10.1371/journal.pone.0047461

Yan, Y., Dononelli, W., Jørgensen, M., Grinderslev, J. B., Lee, Y. S., Cho, Y. W., Černý, R., Hammer, B. & Jensen, T. R. (2020). The mechanism of Mg²⁺ conduction in ammine magnesium borohydride promoted by a neutral molecule. Physical Chemistry Chemical Physics, 22(17), 9204-9209. https://doi.org/10.1039/d0cp00158a

Daasbjerg, K., Svith, H., Grimme, S., Gerenkamp, M., Mück-Lichtenfeld, C., Gansäuer, A., Barchuk, A. & Keller, F. (2006). The Mechanism of Epoxide Opening through Electron Transfer: Experiment and Theory in Concert. Topics in Curr. Chem, 263, 39-69.

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Lise Refstrup Linnebjerg Pedersen