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Interdisciplinary Nanoscience Center

Publications

We publish in a broad array of journals… To view list of publications related to nanoscience/technology by scientists associated with iNANO

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Palle, J., Wittig, N. K., Østergaard, M., Jensen, A. B. & Birkedal, H. (2019). The osteocyte lacuno-canalicular network in bone investigated by synchrotron radiation-based techniques. In B. Müller & G. Wang (Eds.), Developments in X-Ray Tomography XII (Vol. 11113). Article 1111316 SPIE. Digital Library. https://doi.org/10.1117/12.2531980

Coutinho, J., Torres, V. J. B., Marques Pereira, R. N., Nielsen, B. B., Jones, R. & Briddon, P. R. (2006). Theory of anharmonicity on bond-centered hydrogen oscillators in silicon. Physica B, 376-377, 126.

Nielsen, C. L., Andricevic, P., Julsgaard, B., Jain, M., Balling, P. & Martinez Turtos, R. (2023). The origin of room-temperature self-trapped-exciton luminescence in LiF nanoparticles. Physical Review Materials, 7(10), Article 106001. https://doi.org/10.1103/PhysRevMaterials.7.106001

Wang, J. & Hammer, B. (2006). Theoretical study of H_2 O dissociation and CO oxidation on Pt_2 Mo (111). Journal of Catalysis, 243, 192-198.

Nielsen, A. B., Tan, K. O., Shankar, R., Penzel, S., Cadalbert, R., Samoson, A., Meier, B. H. & Ernst, M. (2016). Theoretical description of RESPIRATION-CP. Chemical Physics Letters, 645, 150-156. https://doi.org/10.1016/j.cplett.2015.12.043

Omiste, J. J., Gärttner, M., Schmelcher, P., González-Férez, R., Holmegaard, L., Nielsen, J. H., Stapelfeldt, H. & Küpper, J. (2011). Theoretical description of adiabatic laser alignment and mixed-field orientation: the need for a non-adiabatic model. Physical Chemistry Chemical Physics, 13, 18815-18824. https://doi.org/10.1039/C1CP21195A

Mentink-Vigier, F., Akbey, Ü., Oschkinat, H., Vega, S. & Feintuch, A. (2015). Theoretical aspects of Magic Angle Spinning - Dynamic Nuclear Polarization. Journal of Magnetic Resonance, 258, 102-120. https://doi.org/10.1016/j.jmr.2015.07.001

Zhang, T., Xue, Q., Zhang, S. & Dong, M. (2012). Theoretical approaches to graphene and graphene-based materials. Nano Today, 7(3), 180-200. https://doi.org/10.1016/j.nantod.2012.04.006

Zavorotynska, O., Corno, M., Pinatel, E., Rude, L. H., Ugliengo, P., Jensen, T. R. & Baricco, M. (2012). Theoretical and Experimental Study of LiBH4-LiCl Solid Solution. Crystals, 2, 144-158.

Dyla, M., González Foutel, N. S., Otzen, D. E. & Kjaergaard, M. (2022). The optimal docking strength for reversibly tethered kinases. Proceedings of the National Academy of Sciences (PNAS), 119(25), Article e2203098119. https://doi.org/10.1073/pnas.2203098119

Pakpour-Tabrizi, A. C., Schenk, A. K., Holt, A. J. U., Mahatha, S. K., Arnold, F., Bianchi, M., Jackman, R. B., Butler, J. E., Vikharev, A., Miwa, J. A., Hofmann, P., Cooil, S. P., Wells, J. W. & Mazzola, F. (2020). The occupied electronic structure of ultrathin boron doped diamond. Nanoscale Advances, 2(3), 1358-1364. https://doi.org/10.1039/c9na00593e

Kyrkjebø, S. (2024). The nucleation and growth of interstellar ice on carbonaceous surfaces. [PhD dissertation, Aarhus University].

Lorenzen, N., Lemminger, L., Pedersen, J. N., Nielsen, S. B. & Otzen, D. (2014). The N-terminus of α-synuclein is essential for both monomeric and oligomeric interactions with membranes. FEBS Letters, 588(3), 497-502. https://doi.org/10.1016/j.febslet.2013.12.015

Dabrowski, M., Ashcroft, F. M., Ashfield, R., Lebrun, P., Pirotte, B., Jensen, J. E., J.B., H. & Wahl, P. (2002). The novel diazoxide analog 3-isopropylamino-7methoxy-4H-1,2,4-benzothiadiazine 1,1-dioxide is a selective Kir6.2/SUR1 channel opener. Diabetes, 51, 1896-1906.

Iversen, N. K., Malte, H., Baatrup, E. & Nielsen, T. W. (2012). The normal acid-base status of mice. Respiratory Physiology and Neurobiology, 180, 252-257.

Marzookian, K., Aliakbari, F., Hourfar, H., Sabouni, F., Otzen, D. E. & Morshedi, D. (2025). The neuroprotective effect of human umbilical cord MSCs-derived secretome against α-synuclein aggregates on the blood-brain barrier. International Journal of Biological Macromolecules, 304(Part 1), Article 140387. https://doi.org/10.1016/j.ijbiomac.2025.140387

Helwig, M., Hoshino, A., Berridge, C., Lee, S.-N., Lorenzen, N., Otzen, D., Eriksen, J. & Lindberg, I. (2013). The neuroendocrine protein 7B2 suppresses the aggregation of neurodegenerative disease-related proteins. Journal of Biological Chemistry, 288(2), 1114.

Jarvela, T. S., Lam, H. A., Helwig, M., Lorenzen, N., Otzen, D. E., McLean, P. J., Maidment, N. T. & Lindberg, I. (2016). The neural chaperone proSAAS blocks α-synuclein fibrillation and neurotoxicity. Proceedings of the National Academy of Sciences (PNAS), 113(32), E4708-E4715. https://doi.org/10.1073/pnas.1601091113

Frahm, H., Hansen, S. K., Vad, B. S., Nielsen, E. H., Nielsen, J. T., Vosegaard, T., Skrydstrup, T. & Otzen, D. E. (2015). The natural, peptaibolic peptide SPF-5506-A4 adopts a β-bend spiral structure, shows low hemolytic activity and targets membranes through formation of large pores. Biochimica et Biophysica Acta - Proteins and Proteomics, 1854(8), 882-889. https://doi.org/10.1016/j.bbapap.2015.03.003

Rodriguez-Palomo, A., Vibe, P. A. S., Athanasiadou, D., Palle, J., Nielsen, L. C., Avaro, J. T., Christensen, T. E. K., Wittig, N. K., Jørgensen, M. R. V., Kantor, I., Burghammer, M., Liu, J., Checchia, S., Appel, C., Jørgensen, K. A., Garde, E., Heide-Jørgensen, M. P., Liebi, M. & Birkedal, H. (2026). The narwhal tusk assembles its macroscopic helix from building blocks with opposing twists. Nature Communications, 17(1), Article 8098. https://doi.org/10.1038/s41467-026-75689-z

Gautrot, J., Malmström, J., Sundh, M., Marqadant, C., Sonnenberg, A. & Sutherland, D. S. (2014). The Nanoscale Geometrical Maturation of Focal Adhesions Controls Stem Cell Differentiation and Mechanotransduction. Nano Letters, 14(7), 3945-3952. https://doi.org/10.1021/nl501248y

Fruergaard, S., Lund, M. B., Schramm, A., Vosegaard, T. & Bilde, T. (2021). The myth of antibiotic spider silk. iScience, 24(10), Article 103125. https://doi.org/10.1016/j.isci.2021.103125

Pedersen, F. S., Paludan, K., Dai, H. Y., Duch, M., Jørgensen, P., Kjeldgaard, N. O., Hallberg, B., Grundström, T., Schmidt, J. & Luz, A. (1991). The murine leukemia virus LTR in oncogenesis: effect of point mutations and chromosomal integration sites. Radiation and Environmental Biophysics, 30(3), 195-7.

Zeng, Y., Masini, F., Rasmussen, A. M. H., Groves, M. N., Albert, V., Boukouvalas, J. & McBreen, P. H. (2018). The most stable adsorption geometries of two chiral modifiers on Pt(111). Surface Science, 676, 17-22. https://doi.org/10.1016/j.susc.2018.02.008

Gliemann, J., Hermey, G., Nykjær, A., Petersen, C. M., Jacobsen, C. & Andreasen, P. (2004). The mosaic receptor sorLA/LR11 binds components of the plasminogen activating system and PDGF-BB similarity to low density lipoprotein receptor-related protein (LRP1) but mediates slow internalization of bound. Biochemical Journal, 381, 203-212.

Pittkowski, R., Clausen, C. M., Chen, Q., Stoian, D., van Beek, W., Bucher, J., Welten, R. L., Schlegel, N., Mathiesen, J. K., Nielsen, T. M., Du, J., Rosenkranz, A. W., Bøjesen, E. D., Rossmeisl, J., Jensen, K. M. Ø. & Arenz, M. (2023). The more the better: on the formation of single-phase high entropy alloy nanoparticles as catalysts for the oxygen reduction reaction. EES Catalysis, 1(6), 950-960. https://doi.org/10.1039/D3EY00201B

Röcker, A. E., Müller, J. A., Dietzel, E., Harms, M., Krüger, F., Heid, C., Sowislok, A., Riber, C. F., Kupke, A., Lippold, S., von Einem, J., Beer, J., Knöll, B., Becker, S., Schmidt-Charnasit, J., Otto, M., Vapalahti, O., Zelikin, A. N., Bitan, G. ... Münch, J. (2018). The molecular tweezer CLR01 inhibits Ebola and Zika virus infection. Antiviral Research, 152, 26-35. https://doi.org/10.1016/j.antiviral.2018.02.003

Stenvang, M. R., Andreasen, M. & Otzen, D. (2014). The Molecular Basis for TGFBIp-Related Corneal Dystrophies. In Bio-nanoimaging : Protein Misfolding and Aggregation (pp. 179-188). Elsevier. https://doi.org/10.1016/B978-0-12-394431-3.00016-X

Sharifi, S., Jensen, G. V., Pedersen, J. S., Marti, O. & Amirkhani, M. (2014). The mixture of poly(propylene-glycol)-block-poly(ethylene-glycol)-block-PPG with C₁₂E₅ microemulsion. Physics and Chemistry of Liquids, 52(1), 113-121. https://doi.org/10.1080/00319104.2013.806215

Wang, G., Dorn, K. V., Siebeneichler, S., Valldor, M., Smetana, V. & Mudring, A. V. (2022). The missing link between zeolites and polyoxometalates. Science Advances, 8(46), Article eadd9320. https://doi.org/10.1126/sciadv.add9320, https://doi.org/10.1126/sciadv.add9320

Villadsen, S. B., Bramsen, J. B., Ostenfeld, M. S., Wiklund, E. D., Fristrup, N., Gao, S., Hansen, T. B., Jensen, T. I., Borre, M., Orntoft, T. F., Dyrskjøt, L. & Kjems, J. (2012). The miR-143/-145 cluster regulates plasminogen activator inhibitor-1 in bladder cancer. B J C, 106(2), 366-374. https://doi.org/10.1038/bjc.2011.520

Birkedal, H., Froelich, S., Leemreize, H., Stallbohm, R. & Tseng, Y.-H. (2013). The Mineralized Byssus of Anomia Simplex: a Calcified Attachment System. In H. Birkedal, S. Frølic, H. Leemreiz, R. Stallbohm & Y. H. Tseng (Eds.), Biological and Biomimetic Adhesives: Challenges and Opportunities (pp. 16-26). Royal Society of Chemistry. https://doi.org/10.1039/9781849737135-00016

Pedersen, L. R. L. (2011). The milk protein PP3 - structural and functional studies. SUN-TRYK.

Sarup, P. M., Pedersen, S. M., Nielsen, N. C., Malmendal, A. & Loeschcke, V. (2012). The metabolic profile of long-lived Drosophila melanogaster. PLoS One, 7(10), e47461. https://doi.org/10.1371/journal.pone.0047461

Yan, Y., Dononelli, W., Jørgensen, M., Grinderslev, J. B., Lee, Y. S., Cho, Y. W., Černý, R., Hammer, B. & Jensen, T. R. (2020). The mechanism of Mg²⁺ conduction in ammine magnesium borohydride promoted by a neutral molecule. Physical Chemistry Chemical Physics, 22(17), 9204-9209. https://doi.org/10.1039/d0cp00158a

Daasbjerg, K., Svith, H., Grimme, S., Gerenkamp, M., Mück-Lichtenfeld, C., Gansäuer, A., Barchuk, A. & Keller, F. (2006). The Mechanism of Epoxide Opening through Electron Transfer: Experiment and Theory in Concert. Topics in Curr. Chem, 263, 39-69.

Gately, S., Twardowski, P., Stack, M. S., Cundiff, D. L., Grella, D., Castellino, F. J., Enghild, J., Kwaan, H. C., Lee, F., Kramer, R. A., Volpert, O., Bouck, N. & Soff, G. A. (1997). The mechanism of cancer-mediated conversion of plasminogen to the angiogenesis inhibitor angiostatin. Proceedings of the National Academy of Sciences (PNAS), 94(20), 10868-72.

Frahm, H. (2015). The Many Faces of Amyloid Fibrils: Synthesis, Characterization and Radiolabeling of a Potential Fibril Forming Peptide Inhibitor - Identification of Novel Amyloid Fibril Tracers - Evaluation of Motional Restriction on Fibril Forming Peptides .

Faaborg, A. M. M., Østergaard, M., Langdal, N. K., Kantor, I., Christensen, T. E. K. & Birkedal, H. (2026). The mantis shrimp eye imaged in 3D using 4th generation synchrotron multiscale phase contrast tomography. Journal of Structural Biology, 218(3), Article 108339. https://doi.org/10.1016/j.jsb.2026.108339

Morgensen, JE., Ferreras, M., Wimmer, R., Petersen, S. V., Enghild, J. J. & Otzen, D. (2007). The Major Allergen from Birch Tree Pollen, Bet v 1, Binds and Permeabilizes Membranes. Biochemistry.

Peltzer y Blancá, E. L., Desimoni, J., Christensen, N. E., Emmeric, H. & Cottenier, S. (2009). The magnetization of γ′-Fe₄N: theory vs. experiment. IPPS physica status solidi (b), 246(5), 909-928. https://doi.org/10.1002/pssb.200844401

Madsen, G. K. H., McIntyre, G. J., Schiøtt, B. & Larsen, F. K. (2007). The Low-Barrier Hydrogen Bond of Deuterated Benzoylacetone Probed by Very Low Temperature Neutron and X-ray Diffraction Studies and Theoretical Calculations. Chemistry - A European Journal, 13, 5539-5547. https://doi.org/10.1002/chem.200601490

Malolepszy, A., Mun, T., Sandal, N., Gupta, V., Dubin, M., Urbanski, D. F., Shah, N., Bachmann, A., Fukai, E., Hirakawa, H., Tabata, S., Nadzieja, M., Markmann, K., Su, J., Umehara, Y., Soyano, T., Miyahara, A., Sato, S., Hayashi, M. ... Andersen, S. U. (2016). The LORE1 insertion mutant resource. The Plant Journal, 88(2), 306-317. https://doi.org/10.1111/tpj.13243

Michaels, T. C. T., Yde, P., Willis, J. C. W., Jensen, M. H., Otzen, D., Dobson, C. M., Buell, A. K. & Knowles, T. P. J. (2015). The length distribution of frangible biofilaments. Journal of Chemical Physics, 143(16), 1-15. Article 164901. https://doi.org/10.1063/1.4933230

Mankelow, T. J., Burton, N., Stefansdottir, F. O., Spring, F. A., Parsons, S. F., Pedersen, J. S., Oliveira, C., Lammie, D., Wess, T., Mohandas, N., Chasis, J. A., Brady, R. L. & Anstee, D. J. (2007). The Laminin 511/521-binding site on the Lutheran blood group Glycoprotein is located at the flexible junction of Ig domains 2 and 3. Blood, 110(9), 3398-3406.

Wolf, G., Yang, P., Füchtbauer, A. C., Füchtbauer, E.-M., Silva, A. M., Park, C., Wu, W., Nielsen, A. L., Pedersen, F. S. & Macfarlan, T. S. (2015). The KRAB zinc finger protein ZFP809 is required to initiate epigenetic silencing of endogenous retroviruses. Genes & Development, 29(5), 538-54. https://doi.org/10.1101/gad.252767.114

Shyam, P., Vijayan Pillai, H. & Christensen, M. (2021). The journey from disorder to order: transformation of ferrite magnets investigated in situ by combined Bragg and total scattering analysis. Acta Crystallographica Section A: Foundations of Crystallography, A77(Supplement), C367. https://scripts.iucr.org/cgi-bin/paper?S0108767321093181

Birkedal, H., Broomell, C., Khan, R. K., Slack, N., Lichtenegger, H. C., Zok, F., Stucky, G. D. & Waite, J. H. (2005). The Jaws of Nereis: Microstructure and Mechanical Properties. Mater. Res. Soc. Symp. Proc., 874, 2-2.

Hansen, T. B. & Kjems, J. (2017). The invasion of circRNAs. RNA Biology, 14(8), 973-974. https://doi.org/10.1080/15476286.2017.1360467

Haastrup, M. J., Bianchi, M., Lammich, L. & Lauritsen, J. V. (2023). The interface of in-situ grown single-layer epitaxial MoS₂ on SrTiO₃(001) and (111). Journal of Physics Condensed Matter, 35(19), Article 194001. https://doi.org/10.1088/1361-648X/acbf19

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Lise Refstrup Linnebjerg Pedersen