Publications

We publish in a broad array of journals… To view list of publications related to nanoscience/technology by scientists associated with iNANO

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Pedersen, J. N., Frislev, H. K. S., Pedersen, J. S. & Otzen, D. (2020). Structures and mechanisms of formation of liprotides. Biochimica et Biophysica Acta - Proteins and Proteomics, 1868(11), Article 140505. https://doi.org/10.1016/j.bbapap.2020.140505

Zhou, B., Giavani, T., Bildsøe, H., Skibsted, J. & Jakobsen, H. J. (2005). Structure refinement of CsNO₃(II) by coupling of ¹⁴N MAS NMR experiments with WIEN2k DFT calculations. Chemical Physics Letters, 402, 133-137.

Garg, N. (2015). Structure, reactivity, and dissolution of calcined clays by solid-state NMR.

Meldgaard, S. R. A., Mortensen, H. L., Jorgensen, M. S. & Hammer, B. (2020). Structure prediction of surface reconstructions by deep reinforcement learning. Journal of Physics Condensed Matter, 32(40), Article 404005. https://doi.org/10.1088/1361-648X/ab94f2

Nyborg, J., Nissen, P., Kjeldgaard, M., Thirup, S., Polekhina, G. & Clark, B. F. (1996). Structure of the ternary complex of EF-Tu: macromolecular mimicry in translation. Trends in Biochemical Sciences, 21(3), 81-2.

Merte, L. R., Jorgensen, M. S., Pussi, K., Gustafson, J., Shipilin, M., Schaefer, A., Zhang, C., Rawle, J., Nicklin, C., Thornton, G., Lindsay, R., Hammer, B. & Lundgren, E. (2017). Structure of the SnO2(110)-(4 x 1) Surface. Physical Review Letters, 119(9), Article 096102. https://doi.org/10.1103/PhysRevLett.119.096102

Yatime, L., Hein, K. L., Nilsson, J. & Nissen, P. (2011). Structure of the RACK1 dimer from Saccharomyces cerevisiae. Journal of Molecular Biology, 411(2), 486-98. https://doi.org/10.1016/j.jmb.2011.06.017

Kobberø, S. D., Gajhede, M., Mirza, O. A., Kløverpris, S., Kjær, T. R., Mikkelsen, J. H., Boesen, T. & Oxvig, C. (2022). Structure of the proteolytic enzyme PAPP-A with the endogenous inhibitor stanniocalcin-2 reveals its inhibitory mechanism. Nature Communications, 13(1), Article 6084. https://doi.org/10.1038/s41467-022-33698-8

Pallesen, J., Dong, M., Besenbacher, F. & Kjems, J. (2009). Structure of the HIV-1 Rev response element alone and in complex with regulator of virion (Rev) studied by atomic force microscopy. FEBS journal, 276(15), 4223-32. https://doi.org/10.1111/j.1742-4658.2009.07130.x

Kasper, C., Lunn, M.-L., Liljefors, T., Gouaux, E., Jensen, J. E. & Kastrup, J. S. (2002). Structure of the GluR2 ligand binding core in complex with the agonist (S)-Des-Me-AMPA: Importance of isoxazole moiety and 5 substituent. FEBS Letters, 531, 173-178.

Andersen, C. B. F., Ballut, L., Johansen, J. S., Chamieh, H., Nielsen, K. H., Oliveira, C., Pedersen, J. S., Seraphin, B., LeHir, H. & Andersen, G. R. (2006). Structure of the exon junction core complex with a trapped DEAD-box ATPase bound to RNA. Science, 313, 1968-1972.

Muschiol, S., Erlendsson, S., Aschtgen, M.-S., Oliveira, V., Schmieder, P., de Lichtenberg, C., Teilum, K., Boesen, T., Akbey, U. & Henriques-Normark, B. (2017). Structure of the competence pilus major pilin ComGC in Streptococcus pneumoniae. Journal of Biological Chemistry, 292(34), 14134-14146. https://doi.org/10.1074/jbc.M117.787671

Mönig, H., Sun, J., Koroteev, Y. M., Bihlmayer, G., Wells, J., Chulkov, E. V., Pohl, K. & Hofmann, P. (2005). Structure of the (111) surface of bismuth: LEED analysis and first-principles calculations. Physical Review B, 72.

Zeuthen, H., Kudernatsch, W., Peng, G., Merte, L. R., Ono, K., Lammich, L., Bai, Y., Grabow, L. C., Mavrikakis, M., Wendt, S. & Besenbacher, F. (2013). Structure of Stoichiometric and Oxygen-Rich Ultrathin FeO(111) Films Grown on Pd(111). Journal of Physical Chemistry C. https://doi.org/10.1021/jp4042638

Mortensen, H. G., Jensen, G. V., Hansen, S. K., Vosegaard, T. & Pedersen, J. S. (2018). Structure of phospholipid mixed micelles (Bicelles) studied by small-angle X-ray scattering. Langmuir, 34(48), 14597-14607. https://doi.org/10.1021/acs.langmuir.8b02704

Jensen, G. V., Shi, Q., Hernansanz, M. J., Oliveira, C. L. P. D., Deen, R., Almdal, K. & Pedersen, J. S. (2011). Structure of PEP-PEO block copolymer micelles: exploiting the complementarity of small-angle X-ray scattering and static light scattering. Journal of Applied Crystallography, 44, 473-482. https://doi.org/10.1107/S0021889811013343

Oliveira, C. L. P. D., Jensen, S. J., Jørgensen, H. L., Knudsen, B., Tordrup, D. P., Oteri, F., Falconi, M., Koch, J. E., Desideri, A., Pedersen, J. S., Knudsen, B. R. & Andersen, F. F. (2010). Structure of nano-Scale Truncated Octahedral DNA Cages: Variation of Single-stranded Linker Regions and Influence on Assembly Yields. A C S Nano, 4.

Berndt, I., Pedersen, J. S. & Richtering, W. (2005). Structure of Multiresponsive 'Intelligent' Core-Shell Microgels. Journal of the American Chemical Society, 127, 9372-9373.

Manet, S., Lecchi, A., Imperor-Clerc, M., Zholobenko, V., Durand, D., Oliveira, C. L. P. D., Pedersen, J. S., Grillo, I., Meneau, F. & Rochas, C. (2011). Structure of Micelles of a Nonionic Block Copolymer Determined by SANS and SAXS. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 115(39), 11318-113129. https://doi.org/10.1021/jp200212g

Jensen, J. E., Jensen, H. S., Schousboe, A. (Ed.) & Krogsgaard-Larsen, P. (Ed.) (2001). Structure of ionotropic glutamate receptors. In Glutamate and GABA Receptors: Structure, Function and Pharmacology (pp. 41-56). Taylor & Francis.

Gebhard, W., Hochstrasser, K., Fritz, H., Enghild, J. J., Pizzo, S. V. & Salvesen, G. (1990). Structure of inter-alpha-inhibitor (inter-alpha-trypsin inhibitor) and pre-alpha-inhibitor: current state and proposition of a new terminology. Biological Chemistry Hoppe-Seyler , 371 Suppl, 13-22.

Pedersen, J. S., Oliveira, C. L. P., Hübschmann, H. B., Arleth, L., Manniche, S., Kirkby, N. & Nielsen, H. M. (2012). Structure of immune stimulating complex matrices and immune stimulating complexes in suspension determined by small-angle X-ray scattering. Biophysical Journal, 102(10), 2372-2380. https://doi.org/10.1016/j.bpj.2012.03.071

Jensen, S. J., Oliveira, C. L. P. D., Nielsen, C. J. F., Pedersen, J. S., Andersen, F. F. & Knudsen, B. R. (2008). Structure of human Topoisomerase in Solution. Poster session presented at Nanotech 2008, København, Denmark.

Jensen, S. J., Oliveira, C. L. P. D., Nielsen, C. J. F., Pedersen, J. S., Andersen, F. F. & Knudsen, B. R. (2008). Structure of Human Topoisomerase I in Solution. Abstract from Structure of Human Topoisomerase I in Solution, København, Denmark.

Jensen, S. J., Oliveira, C., Tordrup, D. P., Pedersen, J. S., Andersen, F. F. & Knudsen, B. R. (2008). Structure of Human Topoisomerase I in solution. Poster session presented at 6th annual iNANO meeting.

Jensen, J. E. & Jensen, H. S. (2002). Structure of glutamate receptors in glutamate and GABA receptors and transporters. In Glutamate and GABA Receptors and Transporters: Structure, Function and Pharmacology (pp. 234-256). Taylor & Francis.

Juul, S., Oliveira, C., Nielsen, C. J. F., Jørgensen, H. L., Mancino, A., Pedersen, J. S., Andersen, F. F. & Knudsen, B. R. (2008). Structure of Full length Human Topoisomerase I in Solution. Poster session presented at Structure of Full length Human Topoisomerase I in Solution, United Kingdom.

Andersen, C. B. F., Becker, T., Blau, M., Anand, M., Halic, M., Balar, B., Mielke, T., Boesen, T., Pedersen, J. S., Spahn, C. M. T., Kinzy, T. G., Andersen, G. R. & Beckmann, R. (2006). Structure of eEF3 and the mechanism of transfer RNA release from the E-site. Nature, 443, 663-668.

Fester, J., Sung, Z., Rodriguez-Fernandez, J. & Lauritsen, J. V. (2019). Structure of CoOx Thin Films on Pt(111) in Oxidation of CO. Journal of Physical Chemistry C, 123(28), 17407-17415. https://doi.org/10.1021/acs.jpcc.9b04537

Holst Hansen, K., Byeon, C. H., Liu, Q., Drace, T., Boesen, T., Conway, J. F., Andreasen, M. & Akbey, Ü. (2024). Structure of biofilm-forming functional amyloid PSMα1 from Staphylococcus aureus. Proceedings of the National Academy of Sciences (PNAS), 121(33), Article e2406775121. https://doi.org/10.1073/pnas.2406775121

Fredslund, F., Laursen, N. S., Roversi, P., Jenner, L. B., Oliveira, C. L. P., Pedersen, J. S., Nunn, M. A., Lea, S. M., Discipio, R., Sottrup-Jensen, L. & Andersen, G. R. (2008). Structure of and influence of a tick complement inhibitor on human complement component 5. Nature Immunology, 9(7), 753-60. https://doi.org/10.1038/ni.1625

Yatime, L., Mechulam, Y., Blanquet, S. & Schmitt, E. (2007). Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states. Proceedings of the National Academy of Sciences (PNAS), 104(47), 18445-50. https://doi.org/10.1073/pnas.0706784104

Tian, P., Boomsma, W., Wang, Y., Otzen, D., Jensen, M. H. & Lindorff-Larsen, K. (2015). Structure of a Functional Amyloid Protein Subunit Computed Using Sequence Variation. Journal of the American Chemical Society, 137(1), 22-25. https://doi.org/10.1021/ja5093634

Silale, A., Madej, M., Mikruta, K., Frey, A. M., Hart, A. J., Baslé, A., Scavenius, C., Enghild, J. J., Trost, M., Hirt, R. P. & van den Berg, B. (2025). Structure of a distinct β-barrel assembly machinery complex in the Bacteroidota. Nature Microbiology, 10(11), 2845-2859. https://doi.org/10.1038/s41564-025-02132-2

Sanglas, L., Valnickova, Z., Arolas, J. L., Pallarés, I., Guevara, T., Solà, M., Kristensen, T., Enghild, J. J., Aviles, F. X. & Gomis-Rüth, F. X. (2008). Structure of activated thrombin-activatable fibrinolysis inhibitor, a molecular link between coagulation and fibrinolysis. Molecular Cell, 31(4), 598-606. https://doi.org/10.1016/j.molcel.2008.05.031

Yatime, L., Schmitt, E., Blanquet, S. & Mechulam, Y. (2005). Structure-function relationships of the intact aIF2alpha subunit from the archaeon Pyrococcus abyssi. Biochemistry, 44(24), 8749-56. https://doi.org/10.1021/bi050373i

Christensen, B. S. & Sørensen, E. S. (2016). Structure, function and nutritional potential of milk osteopontin. International Dairy Journal, 57, 1-6. http://dx.doi.org/10.1016/j.idairyj.2016.02.034

McRae, E. K. S., Rasmussen, H. Ø., Liu, J., Bøggild, A., Nguyen, M. T. A., Sampedro Vallina, N., Boesen, T., Pedersen, J. S., Ren, G., Geary, C. & Andersen, E. S. (2023). Structure, folding and flexibility of co-transcriptional RNA origami. Nature Nanotechnology, 18(7), 808-817. https://doi.org/10.1038/s41565-023-01321-6

Pedersen, B. P., Morth, J. P. & Nissen, P. (2010). Structure determination using poorly diffracting membrane protein crystals - Lessons from the H+ and Na+,K+-ATPases. Acta Crystallographica. Section D: Biological Crystallography, 66, 309-313.

Olsen, J. E., Frommen, C., Jensen, T. R., Riktor, M. D., Sørby, M. H. & Hauback, B. C. (2014). Structure and thermal properties of composites with RE-borohydrides (RE = La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Er, Yb or Lu) and LiBH₄. R S C Advances, 4(4), 1570-1582. https://doi.org/10.1039/c3ra44012e

Sljivancanin, Z., Andersen, M., Hornekær, L. & Hammer, B. (2011). Structure and stability of small H clusters on graphene. Physical Review B, 83(20).

Plazzotta, B. (2016). Structure and Stability of Core-Shell Polyelectrolyte Assemblies.

Fester, J., Sun, Z., Rodríguez-Fernández, J., Walton, A. S. & Lauritsen, J. V. (2019). Structure and stability of Au-supported layered cobalt oxide nanoislands in ambient conditions. Journal of Physical Chemistry C, 123(14), 9176-9182. https://doi.org/10.1021/acs.jpcc.9b00771

Svane, K. L., Linderoth, T. R. & Hammer, B. (2016). Structure and role of metal clusters in a metal-organic coordination network determined by density functional theory. The Journal of Chemical Physics, 144(8), Article 084708. https://doi.org/10.1063/1.4942665

Kucharczyk, S., Zajac, M., Stabler, C., Thomsen, R. M., Ben Haha, M., Skibsted, J. & Deja, J. (2019). Structure and reactivity of synthetic CaO-Al₂ O₃ -SiO₂ glasses. Cement and Concrete Research, 120, 77-91. https://doi.org/10.1016/j.cemconres.2019.03.004

Ackermann, M. D., Pedersen, T. M., Henriksen, B. L. M., Robach, O., Bobaru, S. C., Popa, I., Quiros, C., Kim, H., Hammer, B., Ferrer, S. & Frenken, J. W. M. (2005). Structure and reactivity of surface oxides on Pt(110) during catalytic CO Oxidation. Physical Review Letters, 95.

Garg, N. & Skibsted, J. (2013). Structure and reactivity of a thermally activated smectitic clay by solid-state NMR. Poster session presented at 1st International Conference on the Chemistry of Construction Materials, Berlin, Germany.

Garg, N. & Skibsted, J. (2013). Structure and reactivity of a thermally activated montmorillonite by solid-state NMR spectroscopy.. Paper presented at Cement and Concrete Science Conference, Portsmouth, United Kingdom.

Westerström, R., Wang, J., Ackermann, M. D., Gustafson, J., Resta, A., Mikkelsen, A., Andersen, J. N., Lundgren, E., Balmes, O., Torelles, X., Frenken, J. W. M. & Hammer, B. (2008). Structure and reactivity of a model catalyst alloy under realistic conditions. Journal of Physics: Condensed Matter, 20, 184018.

Hartmann, S., Ling, M., Dreyer, L. S. A., Zipori, A., Finster, K., Grawe, S., Jensen, L. Z., Borck, S., Reicher, N., Niedermeier, D., Jones, N. C., Hoffmann, S. V., Wex, H., Rudich, Y., Boesen, T. & Santl-Temkiv, T. (2022). Structure and Protein-Protein Interactions of Ice Nucleation Proteins Drive Their Activity. Frontiers in Microbiology, 13, Article 872306. https://doi.org/10.3389/fmicb.2022.872306

Displaying results 1351 to 1400 out of 8678

Revised 20.08.2024

Lise Refstrup Linnebjerg Pedersen